Factsheet for HORVU2Hr1G062940.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

vacuole 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	extracellular, plastid, vacuole
MultiLoc:	vacuole
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G060490.5
HORVU6Hr1G050500.2
HORVU6Hr1G050520.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68560.1	HORVU1Hr1G060490.5	AT5G05410.1	18552202
AT1G68560.1	HORVU6Hr1G050500.2	AT5G05410.1	18552202
AT1G68560.1	HORVU6Hr1G050520.2	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g007150.2.1	Tomato	extracellular	51.89	9.18
HORVU3Hr1G003540.2	Barley	extracellular, vacuole	66.04	7.34
KRH75375	Soybean	endoplasmic reticulum	61.32	7.0
VIT_01s0011g03450.t01	Wine grape	extracellular	60.38	6.93
KRH45278	Soybean	endoplasmic reticulum	60.38	6.91
HORVU2Hr1G120870.1	Barley	mitochondrion	44.34	6.84
CDY04236	Canola	extracellular, vacuole	55.66	6.81
CDY38593	Canola	extracellular, vacuole	55.66	6.8
CDX96008	Canola	extracellular, vacuole	55.66	6.79
AT1G68560.1	Thale cress	extracellular, vacuole	58.49	6.78
PGSC0003DMT400041054	Potato	endoplasmic reticulum, extracellular, vacuole	59.43	6.77
CDY07378	Canola	extracellular, vacuole	55.66	6.71
KRH35960	Soybean	endoplasmic reticulum	58.49	6.7
CDY44885	Canola	extracellular, vacuole	55.66	6.69
CDX81531	Canola	extracellular, vacuole	54.72	6.58
Bra004031.1-P	Field mustard	extracellular, vacuole	55.66	6.39
Bra004319.1-P	Field mustard	extracellular, vacuole	55.66	6.37
Bra035407.1-P	Field mustard	extracellular, vacuole	55.66	6.36
Solyc05g009470.2.1	Tomato	extracellular	54.72	6.25
PGSC0003DMT400037696	Potato	extracellular	54.72	6.25
AT3G45940.1	Thale cress	vacuole	50.0	6.11
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	44.34	5.37
HORVU7Hr1G106540.2	Barley	cytosol	44.34	5.04
HORVU2Hr1G120880.1	Barley	mitochondrion	41.51	4.77
GSMUA_Achr1P20950_001	Banana	golgi, vacuole	25.47	3.41
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	30.19	2.94
HORVU4Hr1G067520.2	Barley	plasma membrane, vacuole	24.53	2.84
HORVU7Hr1G028010.9	Barley	plastid	28.3	2.82
HORVU4Hr1G023750.2	Barley	mitochondrion	1.89	2.27
HORVU3Hr1G038060.2	Barley	plastid	10.38	1.98
Solyc04g007160.1.1	Tomato	extracellular	4.72	1.86

Protein Annotations

EnsemblPlants:HORVU2Hr1G062940.1	EnsemblPlantsGene:HORVU2Hr1G062940	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_31
PANTHER:PTHR22762	PANTHER:PTHR22762:SF125	PFAM:PF01055	UniParc:UPI000B4739C0	UniProt:A0A287I6P7	MapMan:35.1

Description

No Description!

Coordinates

chrchr2H:+:424903449..424909847

Molecular Weight (calculated)

12554.1 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.067

Length

106 amino acids

Sequence
(BLAST)

001: MQIGFHQCRW GYHNLSVVED VVENYWSAQI PLDMIWNDDD HMDARKDLTL SPVNYSRPKL LAFLDMLLFH WLVSTRVLSW TCASSFPRSS MEPPWSGCSY
101: FMMCLW

Best Arabidopsis Sequence Match ( AT1G68560.1 )
(BLAST)

001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN

Arabidopsis Description

XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.