Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68560.1 | CDX70151 | AT5G05410.1 | 18552202 |
| AT1G68560.1 | CDX98843 | AT5G05410.1 | 18552202 |
| AT1G68560.1 | CDY04950 | AT5G05410.1 | 18552202 |
| AT1G68560.1 | CDY52149 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07378 | Canola | extracellular, vacuole | 98.04 | 96.7 |
| CDY38593 | Canola | extracellular, vacuole | 89.97 | 89.86 |
| CDY44885 | Canola | extracellular, vacuole | 91.12 | 89.57 |
| CDX96008 | Canola | extracellular, vacuole | 89.62 | 89.41 |
| CDX81531 | Canola | extracellular, vacuole | 90.89 | 89.34 |
| AT1G68560.1 | Thale cress | extracellular, vacuole | 87.54 | 82.95 |
| AT3G45940.1 | Thale cress | vacuole | 80.62 | 80.53 |
| KRH75375 | Soybean | endoplasmic reticulum | 73.82 | 68.97 |
| KRH45278 | Soybean | endoplasmic reticulum | 73.24 | 68.57 |
| KRH35960 | Soybean | endoplasmic reticulum | 73.13 | 68.54 |
| VIT_01s0011g03450.t01 | Wine grape | extracellular | 72.55 | 68.07 |
| PGSC0003DMT400037696 | Potato | extracellular | 71.74 | 67.03 |
| GSMUA_Achr1P20950_001 | Banana | golgi, vacuole | 60.9 | 66.75 |
| Solyc05g009470.2.1 | Tomato | extracellular | 71.28 | 66.59 |
| PGSC0003DMT400041054 | Potato | endoplasmic reticulum, extracellular, vacuole | 71.05 | 66.24 |
| Solyc04g007150.2.1 | Tomato | extracellular | 45.21 | 65.44 |
| EES02554 | Sorghum | extracellular, vacuole | 67.01 | 62.61 |
| Zm00001d039994_P001 | Maize | extracellular | 66.32 | 62.03 |
| Os01t0130400-01 | Rice | extracellular | 65.63 | 61.05 |
| TraesCS3B01G041700.1 | Wheat | unclear | 64.36 | 59.05 |
| TraesCS3D01G038300.1 | Wheat | golgi | 64.48 | 58.97 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 64.36 | 58.8 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 64.48 | 58.6 |
| Solyc04g007160.1.1 | Tomato | extracellular | 17.88 | 57.62 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 6.81 | 55.66 |
| CDX78437 | Canola | extracellular, vacuole | 44.98 | 43.72 |
| CDX70414 | Canola | extracellular, plastid, vacuole | 44.75 | 43.21 |
| CDX81200 | Canola | vacuole | 21.68 | 29.33 |
| CDY60045 | Canola | cytosol, nucleus, vacuole | 21.34 | 28.86 |
| CDX84449 | Canola | vacuole | 21.11 | 28.37 |
| CDY43760 | Canola | vacuole | 20.99 | 28.22 |
| CDY18102 | Canola | plastid | 23.41 | 19.01 |
| CDY60313 | Canola | golgi, vacuole | 23.53 | 18.31 |
| CDY56225 | Canola | plasma membrane, plastid, vacuole | 9.69 | 15.11 |
| CDY71267 | Canola | plastid | 4.84 | 14.69 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | MapMan:21.2.1.2.5 | Gene3D:3.20.20.80 | GO:A0A078ESL2 | EnsemblPlants:CDY04236 |
| ProteinID:CDY04236 | ProteinID:CDY04236.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00117963001 |
| InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF16863 | ScanProsite:PS00129 |
| PANTHER:PTHR22762 | PANTHER:PTHR22762:SF125 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EEE8AB | SEG:seg | : | : | : |
Description
BnaC06g25790D
Coordinates
chrLK031950:-:446303..450260
Molecular Weight (calculated)
96805.0 Da
IEP (calculated)
8.843
GRAVY (calculated)
-0.210
Length
867 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPKTVVSS LSLLVALIIC FSPVHSSNTI GKGYRLISVE ESPDGGFIGY LQVKQKTNIY GSDITTLRLF VKHETDNRLR VHITDAKKQR WEVPYNLLPR
101: EQPPRAGKAI GKSPTTVHEI SGSELIFSFT KDPFTFAVKR RSNGQTLFNT SSDSNSPFGQ MVFKDQYLEI STSLPKDASL YGLGENSQAK GIKLVPNEPY
201: TLYTEDVSAI NLNTDLYGSH PVYMDLRNVG GKPYAHAVLL LNSNGMDVFY RGTSLTYKVI GGVFDFYFVA GPSPLDVVDQ YTSLIGRPAP MPYWSLGFHQ
301: CRWGYHNLSV VEDVVDSYKK AKIPLDVIWN DDDHMDAHKD FTLNNISYPR AKLLKFLDRI HKMGMKYIVI NDPGIGVNAS YGVYQRAMAN DVFIKYEGKP
401: FLAQVWPGPV YFPDFLNPKT VAWWGDEIRR FHKLVPIDGL WIDMNEINAT GVTAPVGFKT IATSALHYNG VREYDAHSLY GFSETIATHK GLQSIQGKRP
501: FILSRSTFIG SGRYAAHWTG DNKGTWQSLR VSISTMLNFG IFGVPMVGSD ICGFYPQPTE ELCNRWIEVG AFYPFSRDHA NYYSPRQELY QWDTVAKSAR
601: NALGMRYKLL PYLYTLSYEA HMTGAPVARP LFFSFPEYTK CYGLSTQFLL GSSLMISPVL KKGRTQVKAL FPPGSWYHMF DMTQAVVTKT GKRVALPAPL
701: NFVNVHLYQN TILPMQQGGL VITFPAGATE GYATGKLYLD EDELPEMKLG NGQSTYVDFY ASVGNGTVKM WSQVKEGKFA LSKGWVIEKV SVLGLRGAGP
801: ASEIEVNGSP ISNEAKKIEV SSKEHTYVAG LEEEGENKSV MVELKGLEMM VGKDFNMSWK MGINGAN
101: EQPPRAGKAI GKSPTTVHEI SGSELIFSFT KDPFTFAVKR RSNGQTLFNT SSDSNSPFGQ MVFKDQYLEI STSLPKDASL YGLGENSQAK GIKLVPNEPY
201: TLYTEDVSAI NLNTDLYGSH PVYMDLRNVG GKPYAHAVLL LNSNGMDVFY RGTSLTYKVI GGVFDFYFVA GPSPLDVVDQ YTSLIGRPAP MPYWSLGFHQ
301: CRWGYHNLSV VEDVVDSYKK AKIPLDVIWN DDDHMDAHKD FTLNNISYPR AKLLKFLDRI HKMGMKYIVI NDPGIGVNAS YGVYQRAMAN DVFIKYEGKP
401: FLAQVWPGPV YFPDFLNPKT VAWWGDEIRR FHKLVPIDGL WIDMNEINAT GVTAPVGFKT IATSALHYNG VREYDAHSLY GFSETIATHK GLQSIQGKRP
501: FILSRSTFIG SGRYAAHWTG DNKGTWQSLR VSISTMLNFG IFGVPMVGSD ICGFYPQPTE ELCNRWIEVG AFYPFSRDHA NYYSPRQELY QWDTVAKSAR
601: NALGMRYKLL PYLYTLSYEA HMTGAPVARP LFFSFPEYTK CYGLSTQFLL GSSLMISPVL KKGRTQVKAL FPPGSWYHMF DMTQAVVTKT GKRVALPAPL
701: NFVNVHLYQN TILPMQQGGL VITFPAGATE GYATGKLYLD EDELPEMKLG NGQSTYVDFY ASVGNGTVKM WSQVKEGKFA LSKGWVIEKV SVLGLRGAGP
801: ASEIEVNGSP ISNEAKKIEV SSKEHTYVAG LEEEGENKSV MVELKGLEMM VGKDFNMSWK MGINGAN
001: MASCLSLLVA IILCFSSLQC SNAIGKGYRL ISMEKSPDDG SFIGYLQVKQ SNKIYGSDIT ILRLFINYRT DHRLRVHITD AKKQRWEVPY NLLRREQPPN
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR
Arabidopsis Description
XYL2Putative alpha-xylosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4J6T7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.