Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G060490.5 | |
| HORVU6Hr1G050500.2 | |
| HORVU6Hr1G050520.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68560.1 | HORVU1Hr1G060490.5 | AT5G05410.1 | 18552202 |
| AT1G68560.1 | HORVU6Hr1G050500.2 | AT5G05410.1 | 18552202 |
| AT1G68560.1 | HORVU6Hr1G050520.2 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G042100.1 | Wheat | nucleus | 94.76 | 95.26 |
| TraesCS3D01G038300.1 | Wheat | golgi | 94.13 | 94.73 |
| TraesCS3B01G041700.1 | Wheat | unclear | 92.45 | 93.33 |
| EES02554 | Sorghum | extracellular, vacuole | 80.4 | 82.65 |
| Zm00001d039994_P001 | Maize | extracellular | 79.87 | 82.2 |
| Os01t0130400-01 | Rice | extracellular | 77.99 | 79.83 |
| GSMUA_Achr1P20950_001 | Banana | golgi, vacuole | 59.64 | 71.93 |
| VIT_01s0011g03450.t01 | Wine grape | extracellular | 64.57 | 66.67 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 7.34 | 66.04 |
| Solyc04g007150.2.1 | Tomato | extracellular | 41.3 | 65.78 |
| KRH35960 | Soybean | endoplasmic reticulum | 63.42 | 65.41 |
| KRH75375 | Soybean | endoplasmic reticulum | 62.79 | 64.55 |
| CDY04236 | Canola | extracellular, vacuole | 58.6 | 64.48 |
| KRH45278 | Soybean | endoplasmic reticulum | 62.58 | 64.47 |
| AT1G68560.1 | Thale cress | extracellular, vacuole | 61.64 | 64.26 |
| Bra004031.1-P | Field mustard | extracellular, vacuole | 61.95 | 63.96 |
| CDY07378 | Canola | extracellular, vacuole | 58.91 | 63.94 |
| CDY38593 | Canola | extracellular, vacuole | 58.07 | 63.82 |
| CDX81531 | Canola | extracellular, vacuole | 58.8 | 63.61 |
| Bra035407.1-P | Field mustard | extracellular, vacuole | 61.74 | 63.54 |
| CDY44885 | Canola | extracellular, vacuole | 58.6 | 63.38 |
| PGSC0003DMT400041054 | Potato | endoplasmic reticulum, extracellular, vacuole | 61.74 | 63.33 |
| CDX96008 | Canola | extracellular, vacuole | 57.55 | 63.18 |
| Bra004319.1-P | Field mustard | extracellular, vacuole | 61.22 | 63.07 |
| PGSC0003DMT400037696 | Potato | extracellular | 59.64 | 61.31 |
| Solyc05g009470.2.1 | Tomato | extracellular | 59.54 | 61.21 |
| AT3G45940.1 | Thale cress | vacuole | 54.4 | 59.79 |
| Solyc04g007160.1.1 | Tomato | extracellular | 13.73 | 48.7 |
| HORVU2Hr1G120870.1 | Barley | mitochondrion | 34.8 | 48.33 |
| HORVU7Hr1G106540.2 | Barley | cytosol | 45.07 | 46.14 |
| HORVU2Hr1G120920.3 | Barley | endoplasmic reticulum, extracellular, vacuole | 41.93 | 45.71 |
| HORVU2Hr1G120880.1 | Barley | mitochondrion | 43.61 | 45.07 |
| HORVU4Hr1G067520.2 | Barley | plasma membrane, vacuole | 25.26 | 26.34 |
| HORVU4Hr1G023750.2 | Barley | mitochondrion | 1.99 | 21.59 |
| HORVU7Hr1G028010.9 | Barley | plastid | 23.06 | 20.66 |
| HORVU1Hr1G057330.1 | Barley | cytosol, mitochondrion | 23.17 | 20.33 |
| HORVU3Hr1G038060.2 | Barley | plastid | 6.29 | 10.81 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | MapMan:21.2.1.2.5 | Gene3D:3.20.20.80 | UniProt:A0A287JYJ1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom |
| InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU3Hr1G003540 |
| EnsemblPlants:HORVU3Hr1G003540.2 | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF16863 | ScanProsite:PS00129 |
| PFscan:PS51257 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF125 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 |
| SignalP:SignalP-noTM | UniParc:UPI000181BA79 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:9091764..9096195
Molecular Weight (calculated)
105297.0 Da
IEP (calculated)
7.514
GRAVY (calculated)
-0.151
Length
954 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPRPPSHLL PWRCLLLLLL TLTLACTSNG VSATAKAKHK AKAPAAAPKP AGFGYRLVSL VQRPNGGGLV GLLQVKRRSS TFGPDIPRLR LFVKHETKDR
101: VRVQVTDAEK QRWEVPYDLL PREPSPPLGV ATDGHGAPFT VGEYPGQDLV FTYGRDPFWF AVHRRSTRQP LFNTSGAPLV FKDQYLEVST RLPGDAALYG
201: LGENTQPGGI KLRPNDPYTL YTTDASAINL NTDLYGSHPV YVDLRNLAGR GVAHAVLLLN SNGMDVFYTG TSLTYKVIGG LLDFYFFAGP TPLAVVDQYT
301: AMIGRPAPMP YWAFGFHQCR WGYHNLSVVE DVVENYRSAQ IPLDVIWNDD DHMDARKDFT LSPVNYPRPK LLAFLDKIHK RGMKYIVLID PGINVNDTYG
401: VYQRGMQRDI FIKLDGQPYL AQVWPGPVYF PDFINPNGAS WWIDEVRRFH ELVPVDGLWI DMNEASNFCT GKCTIPTTHR CPDPTSKEPW LCCLDCKNIT
501: NTRWDEPPYK INASGKTARL GFNTIATSAV HYNGILEYNA HSLYGFSQAI ATHKGLQSIQ GKRPFILTRS TFIGSGAYAA HWTGDNKGTW EDLRYSISTM
601: LNFGIFGMPM VGADICGFYP AKPPPLEELC SRWIELGAFY PFSRDHANFA SARQELYQWE SVARSARNAL GMRYRMLPYL YTLNYQAHLT GAPVARPLFF
701: SFPDFAPCYG VSNQFLLGAG VMVSPVLEQG ASSVDAVFPP GTWYNLFDTS KAVVSTGSGA AVRLPAPLNE VNVHVHQGTV LPLQRGGTIS RDARATPFTL
801: VVAFPLGAAD ADAEGAVYVD DDERPAMVLT EGQATYARFH AAVRGGKEVT VRSDVAMGSY VMHKGLVIER ITVLGLHGAG RDLAIRVDGA DDDATAVAVA
901: TSRPYFLAAD AQVMHRGEED AVEGEKRGVT MEVGGLELPL GKSFTMTWNM HIEA
101: VRVQVTDAEK QRWEVPYDLL PREPSPPLGV ATDGHGAPFT VGEYPGQDLV FTYGRDPFWF AVHRRSTRQP LFNTSGAPLV FKDQYLEVST RLPGDAALYG
201: LGENTQPGGI KLRPNDPYTL YTTDASAINL NTDLYGSHPV YVDLRNLAGR GVAHAVLLLN SNGMDVFYTG TSLTYKVIGG LLDFYFFAGP TPLAVVDQYT
301: AMIGRPAPMP YWAFGFHQCR WGYHNLSVVE DVVENYRSAQ IPLDVIWNDD DHMDARKDFT LSPVNYPRPK LLAFLDKIHK RGMKYIVLID PGINVNDTYG
401: VYQRGMQRDI FIKLDGQPYL AQVWPGPVYF PDFINPNGAS WWIDEVRRFH ELVPVDGLWI DMNEASNFCT GKCTIPTTHR CPDPTSKEPW LCCLDCKNIT
501: NTRWDEPPYK INASGKTARL GFNTIATSAV HYNGILEYNA HSLYGFSQAI ATHKGLQSIQ GKRPFILTRS TFIGSGAYAA HWTGDNKGTW EDLRYSISTM
601: LNFGIFGMPM VGADICGFYP AKPPPLEELC SRWIELGAFY PFSRDHANFA SARQELYQWE SVARSARNAL GMRYRMLPYL YTLNYQAHLT GAPVARPLFF
701: SFPDFAPCYG VSNQFLLGAG VMVSPVLEQG ASSVDAVFPP GTWYNLFDTS KAVVSTGSGA AVRLPAPLNE VNVHVHQGTV LPLQRGGTIS RDARATPFTL
801: VVAFPLGAAD ADAEGAVYVD DDERPAMVLT EGQATYARFH AAVRGGKEVT VRSDVAMGSY VMHKGLVIER ITVLGLHGAG RDLAIRVDGA DDDATAVAVA
901: TSRPYFLAAD AQVMHRGEED AVEGEKRGVT MEVGGLELPL GKSFTMTWNM HIEA
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Arabidopsis Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.