Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38593 | Canola | extracellular, vacuole | 84.15 | 88.71 |
| CDY44885 | Canola | extracellular, vacuole | 85.36 | 88.55 |
| Bra004319.1-P | Field mustard | extracellular, vacuole | 89.29 | 88.23 |
| CDX96008 | Canola | extracellular, vacuole | 83.72 | 88.15 |
| CDX81531 | Canola | extracellular, vacuole | 84.92 | 88.1 |
| Bra035407.1-P | Field mustard | extracellular, vacuole | 89.18 | 88.03 |
| Bra004031.1-P | Field mustard | extracellular, vacuole | 88.63 | 87.77 |
| CDY04236 | Canola | extracellular, vacuole | 82.95 | 87.54 |
| CDY07378 | Canola | extracellular, vacuole | 83.93 | 87.37 |
| AT3G45940.1 | Thale cress | vacuole | 77.27 | 81.45 |
| KRH75375 | Soybean | endoplasmic reticulum | 75.63 | 74.57 |
| KRH45278 | Soybean | endoplasmic reticulum | 74.54 | 73.65 |
| KRH35960 | Soybean | endoplasmic reticulum | 73.77 | 72.97 |
| Solyc04g007150.2.1 | Tomato | extracellular | 47.54 | 72.62 |
| VIT_01s0011g03450.t01 | Wine grape | extracellular | 72.68 | 71.97 |
| PGSC0003DMT400041054 | Potato | endoplasmic reticulum, extracellular, vacuole | 72.57 | 71.4 |
| PGSC0003DMT400037696 | Potato | extracellular | 71.91 | 70.91 |
| Solyc05g009470.2.1 | Tomato | extracellular | 71.8 | 70.8 |
| GSMUA_Achr1P20950_001 | Banana | golgi, vacuole | 59.56 | 68.9 |
| EES02554 | Sorghum | extracellular, vacuole | 66.67 | 65.73 |
| Zm00001d039994_P001 | Maize | extracellular | 66.01 | 65.16 |
| Os01t0130400-01 | Rice | extracellular | 65.46 | 64.27 |
| TraesCS3D01G038300.1 | Wheat | golgi | 64.92 | 62.66 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 64.37 | 62.07 |
| TraesCS3B01G041700.1 | Wheat | unclear | 64.04 | 62.01 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 64.26 | 61.64 |
| Solyc04g007160.1.1 | Tomato | extracellular | 17.6 | 59.85 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 6.78 | 58.49 |
| AT5G11720.1 | Thale cress | vacuole | 44.04 | 44.68 |
| AT5G63840.2 | Thale cress | plasma membrane, vacuole | 24.92 | 24.05 |
| AT3G23640.3 | Thale cress | plastid | 22.62 | 19.53 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | MapMan:21.2.1.2.5 | Gene3D:3.20.20.80 | EntrezGene:843185 | ProteinID:AAD37363.1 |
| ProteinID:AAD49987.1 | ProteinID:AEE34811.1 | EMBL:AF087483 | ArrayExpress:AT1G68560 | EnsemblPlantsGene:AT1G68560 | RefSeq:AT1G68560 |
| TAIR:AT1G68560 | RefSeq:AT1G68560-TAIR-G | EnsemblPlants:AT1G68560.1 | TAIR:AT1G68560.1 | Symbol:ATXYL1 | EMBL:AY057482 |
| Unigene:At.24728 | EMBL:BT002675 | GO:GO:0000272 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009044 | GO:GO:0009056 |
| GO:GO:0009505 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 | GO:GO:0045493 |
| GO:GO:0046556 | GO:GO:0046686 | GO:GO:0048046 | GO:GO:0061634 | GO:GO:0071555 | GO:GO:0080176 |
| InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | RefSeq:NP_177023.1 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF16863 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 | PO:PO:0006340 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF125 |
| UniProt:Q9S7Y7 | SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM | UniParc:UPI00000AC02E |
| SEG:seg | : | : | : | : | : |
Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
Coordinates
chr1:-:25734060..25738134
Molecular Weight (calculated)
102404.0 Da
IEP (calculated)
6.762
GRAVY (calculated)
-0.213
Length
915 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.