Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 4
- mitochondrion 2
- vacuole 3
- extracellular 3
- endoplasmic reticulum 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02554 | Sorghum | extracellular, vacuole | 76.23 | 64.98 |
| Zm00001d039994_P001 | Maize | extracellular | 75.73 | 64.62 |
| Os01t0130400-01 | Rice | extracellular | 75.73 | 64.27 |
| TraesCS3D01G038300.1 | Wheat | golgi | 73.58 | 61.39 |
| TraesCS3B01G041700.1 | Wheat | unclear | 73.32 | 61.38 |
| CDY07378 | Canola | extracellular, vacuole | 68.02 | 61.21 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 73.2 | 61.01 |
| CDY04236 | Canola | extracellular, vacuole | 66.75 | 60.9 |
| VIT_01s0011g03450.t01 | Wine grape | extracellular | 70.54 | 60.39 |
| KRH35960 | Soybean | endoplasmic reticulum | 70.54 | 60.32 |
| KRH75375 | Soybean | endoplasmic reticulum | 70.54 | 60.13 |
| CDY38593 | Canola | extracellular, vacuole | 65.87 | 60.02 |
| Bra004031.1-P | Field mustard | extracellular, vacuole | 70.04 | 59.96 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 71.93 | 59.64 |
| CDX81531 | Canola | extracellular, vacuole | 66.5 | 59.64 |
| KRH45278 | Soybean | endoplasmic reticulum | 69.79 | 59.61 |
| CDX96008 | Canola | extracellular, vacuole | 65.49 | 59.61 |
| AT1G68560.1 | Thale cress | extracellular, vacuole | 68.9 | 59.56 |
| CDY44885 | Canola | extracellular, vacuole | 66.25 | 59.41 |
| Bra004319.1-P | Field mustard | extracellular, vacuole | 68.27 | 58.32 |
| PGSC0003DMT400041054 | Potato | endoplasmic reticulum, extracellular, vacuole | 68.52 | 58.28 |
| Bra035407.1-P | Field mustard | extracellular, vacuole | 67.64 | 57.71 |
| AT3G45940.1 | Thale cress | vacuole | 63.21 | 57.6 |
| PGSC0003DMT400037696 | Potato | extracellular | 66.88 | 57.0 |
| Solyc05g009470.2.1 | Tomato | extracellular | 66.37 | 56.57 |
| Solyc04g007150.2.1 | Tomato | extracellular | 41.97 | 55.43 |
| Solyc04g007160.1.1 | Tomato | extracellular | 18.2 | 53.53 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 42.86 | 48.22 |
| GSMUA_Achr3P23340_001 | Banana | cytoskeleton, cytosol, peroxisome | 39.06 | 47.18 |
| GSMUA_Achr3P23330_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 7.46 | 36.88 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 3.41 | 25.47 |
| GSMUA_Achr1P22850_001 | Banana | cytosol | 18.96 | 25.17 |
| GSMUA_Achr11P... | Banana | plastid | 23.26 | 16.2 |
| GSMUA_Achr9P17320_001 | Banana | cytosol | 15.42 | 13.86 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | MapMan:21.2.1.2.5 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030246 | EnsemblPlantsGene:GSMUA_Achr1G20950_001 | EnsemblPlants:GSMUA_Achr1P20950_001 | EnsemblPlants:GSMUA_Achr1T20950_001 | InterPro:Gal_mutarotase_N |
| InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 |
| UniProt:M0S1Q3 | PFAM:PF01055 | PFAM:PF16863 | ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF125 |
| SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002955C9F |
| SEG:seg | : | : | : | : | : |
Description
Alpha-xylosidase [Source:GMGC_GENE;Acc:GSMUA_Achr1G20950_001]
Coordinates
chr1:-:15766864..15770744
Molecular Weight (calculated)
87506.2 Da
IEP (calculated)
7.138
GRAVY (calculated)
-0.133
Length
791 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRRRMSSSS SSSPSLLHLA LCCVTTLFAL HFSAAAKPPK VGFGYRLVSI EESTNGGGLI GYLQVKQSTS TYGPDIPHLR LFVKHETQDR LRVHITDAEE
101: QRWEVPYDLL PRDQPPPPGA KASSSPFTAS EYAGGDLIFS FTSDPFTFAV RRKSNGQTLF DSSYGTMVFK DQYLEISTHL PKTAALYGLG ENTQPGGIRL
201: RPNDPYTLYT TDISAINLNT DLYGSHPVSL TYKVIGGVLD FFFFAGPSPL AVVDQYTTLI GRPAPMPYWA LGFHQCRWGY QNLSFLDRIH SRGMKYIVLI
301: DPGIAVNSSY GVFQRGMAKN VFIKYEGKPY LAQVWPGPVY FPDYLNPDGV SWWIDEIARF HEMVPVDGLW IDMNEASNFC TGKCELPTNH SWDDPPYKIN
401: ASGSRAPLGF KTIATSATHY NGILEYNAHS LYGFSQAIAT HKALQGLQGK RPFILSRSTF VGSGAYAAHW TGDNKGTWDD LRYSISTMLN FGLFGMPMVG
501: SDICGFYPAP TEELCNRWIE LGAFYPFSRD HANFASPRQE LYQWASVAES ARNALGLRYK LLPYLYTLNY EAHTTGAPMA RPVFFSFPNF TSSYGLSTQF
601: LLGASVMVSP VLKKAATSVK AMFPPGTWYS LFDMTKAVVS QDDRFVTLDA PLNAVNAHVY QNTILPLQRG GTNSKEARTT PFTLVVAFPF GATQGDAKGS
701: VYVDDDERPE MKLAEGEASF IEFYATVSGS TVKVWSEVEM GAFSLEKGLL IEKVCVLGLQ GNGQGLVVEV GGLSLPLGKT FSMTWKMGIK E
101: QRWEVPYDLL PRDQPPPPGA KASSSPFTAS EYAGGDLIFS FTSDPFTFAV RRKSNGQTLF DSSYGTMVFK DQYLEISTHL PKTAALYGLG ENTQPGGIRL
201: RPNDPYTLYT TDISAINLNT DLYGSHPVSL TYKVIGGVLD FFFFAGPSPL AVVDQYTTLI GRPAPMPYWA LGFHQCRWGY QNLSFLDRIH SRGMKYIVLI
301: DPGIAVNSSY GVFQRGMAKN VFIKYEGKPY LAQVWPGPVY FPDYLNPDGV SWWIDEIARF HEMVPVDGLW IDMNEASNFC TGKCELPTNH SWDDPPYKIN
401: ASGSRAPLGF KTIATSATHY NGILEYNAHS LYGFSQAIAT HKALQGLQGK RPFILSRSTF VGSGAYAAHW TGDNKGTWDD LRYSISTMLN FGLFGMPMVG
501: SDICGFYPAP TEELCNRWIE LGAFYPFSRD HANFASPRQE LYQWASVAES ARNALGLRYK LLPYLYTLNY EAHTTGAPMA RPVFFSFPNF TSSYGLSTQF
601: LLGASVMVSP VLKKAATSVK AMFPPGTWYS LFDMTKAVVS QDDRFVTLDA PLNAVNAHVY QNTILPLQRG GTNSKEARTT PFTLVVAFPF GATQGDAKGS
701: VYVDDDERPE MKLAEGEASF IEFYATVSGS TVKVWSEVEM GAFSLEKGLL IEKVCVLGLQ GNGQGLVVEV GGLSLPLGKT FSMTWKMGIK E
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Arabidopsis Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.