Factsheet for Os01t0130400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
golgi 4
extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 19038476
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02554	Sorghum	extracellular, vacuole	87.66	88.04
Zm00001d039994_P001	Maize	extracellular	87.45	87.92
TraesCS3D01G038300.1	Wheat	golgi	80.79	79.43
TraesCS3A01G042100.1	Wheat	nucleus	80.36	78.93
TraesCS3B01G041700.1	Wheat	unclear	79.83	78.73
HORVU3Hr1G003540.2	Barley	extracellular, vacuole	79.83	77.99
GSMUA_Achr1P20950_001	Banana	golgi, vacuole	64.27	75.73
KRH75375	Soybean	endoplasmic reticulum	66.95	67.24
KRH45278	Soybean	endoplasmic reticulum	66.74	67.17
VIT_01s0011g03450.t01	Wine grape	extracellular	66.42	66.99
KRH35960	Soybean	endoplasmic reticulum	65.45	65.95
Solyc04g007150.2.1	Tomato	extracellular	42.27	65.78
CDY04236	Canola	extracellular, vacuole	61.05	65.63
AT1G68560.1	Thale cress	extracellular, vacuole	64.27	65.46
CDY07378	Canola	extracellular, vacuole	61.7	65.42
Bra004031.1-P	Field mustard	extracellular, vacuole	64.7	65.26
CDY44885	Canola	extracellular, vacuole	61.16	64.63
PGSC0003DMT400041054	Potato	endoplasmic reticulum, extracellular, vacuole	64.48	64.62
CDY38593	Canola	extracellular, vacuole	60.09	64.52
CDX81531	Canola	extracellular, vacuole	61.05	64.51
CDX96008	Canola	extracellular, vacuole	60.09	64.44
Bra035407.1-P	Field mustard	extracellular, vacuole	64.06	64.4
Bra004319.1-P	Field mustard	extracellular, vacuole	63.73	64.15
PGSC0003DMT400037696	Potato	extracellular	62.34	62.61
Solyc05g009470.2.1	Tomato	extracellular	62.23	62.5
AT3G45940.1	Thale cress	vacuole	57.3	61.52
Solyc04g007160.1.1	Tomato	extracellular	15.24	52.79
Os06t0676700-01	Rice	plastid	46.14	48.53
Os06t0675700-01	Rice	nucleus	45.49	47.91
Os03t0216600-01	Rice	plastid	24.57	26.57
Os07t0421300-01	Rice	nucleus, plasma membrane, vacuole	23.71	22.55
Os07t0420700-01	Rice	plasma membrane	23.39	21.16
Os01t0268600-01	Rice	plastid	14.48	14.48

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	MapMan:21.2.1.2.5	Gene3D:3.20.20.80	EntrezGene:4325976	EMBL:AK102309
ProteinID:BAF03836.1	ProteinID:BAS70209.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
InterPro:Gal_mutarotase_N	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_31_N_dom
InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	EnsemblPlantsGene:Os01g0130400	EnsemblPlants:Os01t0130400-01	PFAM:PF01055
PFAM:PF13802	PFAM:PF16863	ScanProsite:PS00129	ScanProsite:PS00707	PANTHER:PTHR22762	PANTHER:PTHR22762:SF125
UniProt:Q0JQZ2	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	SignalP:SignalP-noTM	UniParc:UPI0000DD8946
RefSeq:XP_015622373.1	SEG:seg	:	:	:	:

Description

Similar to Alpha-xylosidase precursor (Fragment). (Os01t0130400-01)

Coordinates

chr1:+:1698203..1703090

Molecular Weight (calculated)

102973.0 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.107

Length

932 amino acids

Sequence
(BLAST)

001: MREMLASLSS SSRAAISCIP LCLLFLTLAS SNGVFAAAPP KVGSGYKLVS LVEHPEGGAL VGYLQVKQRT STYGPDIPLL RLYVKHETKD RIRVQITDAD
101: KPRWEVPYNL LQREPAPPVT GGRITGVPFA AGEYPGEELV FTYGRDPFWF AVHRKSSREA LFNTSCGALV FKDQYIEAST SLPRDAALYG LGENTQPGGI
201: RLRPNDPYTI YTTDISAINL NTDLYGSHPV YVDLRSRGGH GVAHAVLLLN SNGMDVFYRG TSLTYKVIGG LLDFYLFSGP TPLAVVDQYT SMIGRPAPMP
301: YWAFGFHQCR WGYKNLSVVE GVVEGYRNAQ IPLDVIWNDD DHMDAAKDFT LDPVNYPRPK LLEFLDKIHA QGMKYIVLID PGIAVNNTYG VYQRGMQGDV
401: FIKLDGKPYL AQVWPGPVYF PDFLNPNGVS WWIDEVRRFH DLVPVDGLWI DMNEASNFCT GKCEIPTTHL CPLPNTTTPW VCCLDCKNLT NTRWDEPPYK
501: INASGQTARL GFNTIATSAT HYNGILEYNA HSLYGFSQAI ATHQALQGLQ GKRPFILTRS TFVGSGAYAA HWTGDNKGTW ENLRYSISTM LNFGIFGMPM
601: VGADICGFYP QPTEELCNRW IELGAFYPFS RDHANFASPR QELYVWESVA KSARNALGMR YRLLPYLYTL NYQAHLTGAP VARPVFFSFP DFTPCYGLST
701: QYLLGASVMV SPVLEQGATS VSAMFPPGSW YNLFDTTKVV VSRGEGAVKL DAPLNEINVH VFQNTILPMQ RGGTISKEAR ATPFTLVVAF PFGATEAEAE
801: GAVYVDDDER PEMVLAEGQA TYVRFYATVR GKAVTVRSEV ELGSYSLQKG LLIEKLSVLG LEGTGRDLAV HVDGANATAI ATSRPYFAGA EAELHGHRDV
901: EGHKKSVMVE VGGLALPLGK SFTMTWNMQI EA

Best Arabidopsis Sequence Match ( AT1G68560.1 )
(BLAST)

001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN

Arabidopsis Description

XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.