Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
endoplasmic reticulum: 27224218 mitochondrion: 27780359 endoplasmic reticulum: 28499913 nucleus: 28499913 |
msms PMID:
21132161
doi
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID:
27780359
doi
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75375 | Soybean | endoplasmic reticulum | 96.11 | 95.91 |
| KRH35960 | Soybean | endoplasmic reticulum | 81.21 | 81.3 |
| VIT_01s0011g03450.t01 | Wine grape | extracellular | 77.0 | 77.16 |
| Solyc04g007150.2.1 | Tomato | extracellular | 49.03 | 75.79 |
| AT1G68560.1 | Thale cress | extracellular, vacuole | 73.65 | 74.54 |
| Bra004319.1-P | Field mustard | extracellular, vacuole | 74.51 | 74.51 |
| CDY38593 | Canola | extracellular, vacuole | 69.76 | 74.42 |
| Bra004031.1-P | Field mustard | extracellular, vacuole | 74.08 | 74.24 |
| PGSC0003DMT400041054 | Potato | endoplasmic reticulum, extracellular, vacuole | 74.51 | 74.19 |
| CDX96008 | Canola | extracellular, vacuole | 69.55 | 74.11 |
| CDX81531 | Canola | extracellular, vacuole | 70.52 | 74.04 |
| CDY44885 | Canola | extracellular, vacuole | 70.41 | 73.92 |
| Bra035407.1-P | Field mustard | extracellular, vacuole | 73.97 | 73.89 |
| CDY07378 | Canola | extracellular, vacuole | 69.65 | 73.38 |
| CDY04236 | Canola | extracellular, vacuole | 68.57 | 73.24 |
| PGSC0003DMT400037696 | Potato | extracellular | 72.89 | 72.74 |
| Solyc05g009470.2.1 | Tomato | extracellular | 72.68 | 72.52 |
| GSMUA_Achr1P20950_001 | Banana | golgi, vacuole | 59.61 | 69.79 |
| AT3G45940.1 | Thale cress | vacuole | 64.69 | 69.01 |
| Zm00001d039994_P001 | Maize | extracellular | 67.17 | 67.1 |
| EES02554 | Sorghum | extracellular, vacuole | 67.17 | 67.03 |
| Os01t0130400-01 | Rice | extracellular | 67.17 | 66.74 |
| TraesCS3D01G038300.1 | Wheat | golgi | 64.79 | 63.29 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 64.79 | 63.22 |
| TraesCS3B01G041700.1 | Wheat | unclear | 64.25 | 62.96 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 64.47 | 62.58 |
| Solyc04g007160.1.1 | Tomato | extracellular | 17.6 | 60.59 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 6.91 | 60.38 |
| KRH11838 | Soybean | vacuole | 33.91 | 48.83 |
| KRH11840 | Soybean | cytosol, nucleus | 23.87 | 46.82 |
| KRH36850 | Soybean | nucleus | 44.06 | 45.48 |
| KRH11839 | Soybean | extracellular | 43.84 | 43.33 |
| KRH53951 | Soybean | cytosol, nucleus, vacuole | 21.38 | 24.0 |
| KRH63987 | Soybean | endoplasmic reticulum | 23.43 | 23.74 |
| KRH62685 | Soybean | nucleus | 22.89 | 20.13 |
| KRH66765 | Soybean | plastid | 14.47 | 15.26 |
Protein Annotations
| EntrezGene:100813344 | Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | MapMan:21.2.1.2.5 | Gene3D:3.20.20.80 | EMBL:ACUP02005056 |
| EnsemblPlantsGene:GLYMA_08G262800 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | InterPro:Gal_mutarotase_N |
| InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF |
| UniProt:I1KWV4 | InterPro:IPR013780 | EnsemblPlants:KRH45278 | ProteinID:KRH45278 | ProteinID:KRH45278.1 | PFAM:PF01055 |
| PFAM:PF13802 | PFAM:PF16863 | ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF125 | SUPFAM:SSF51011 |
| SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233828F | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:-:27784835..27790073
Molecular Weight (calculated)
102825.0 Da
IEP (calculated)
6.615
GRAVY (calculated)
-0.193
Length
926 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSPHCFAAL SLSCLLLAML LCAVGATSSS KNATKIGQGY RLVSIEETPD GGLIGILQVK QKTKTYGPDI PLLRFYVKHE AENRLRVHIT DAQKQRWEVP
101: YNLLPREQPP PLSQSIGKSR KNPITVSQYS GSEFLFSYTS DPFSFAVKRK SNGETLFDTT SGDSDPFSSL VFKDQYLEIS TKLPKDASLY GLGENTQPHG
201: IKLYPSDPYT LYTTDISAIN LNADLYGSHP VYMDLRNAGG KASAHAVLLL NSNGMDVFYT GTSLTYKIIG GVFDFYFFSG PSPLNVVDQY TSLIGRPAPM
301: PYWAFGFHQC RWGYHNLSVV EDVVENYKKA QIPLDVIWND DDHMEGKKDF TLNPVNYPRP KLLKFLDKIH NFGMKYIVII DPGIAVNTSY GVYQRGIAND
401: VFIKYDGEPF LAQVWPGAVN FPDFLNPKTV SWWVDEIRRF HELVPVDGLW IDMNEVSNFC SGKCKIPEGQ CPTGTGPGWI CCLDCKNITK TRWDDPPYKI
501: NASGIKAPIG FKTIATSAYH YNGVLEYDAH SLYGFSQSVA THKGLQGLQG KRPFILSRST YVGSGKYAAH WTGDNQGTWE NLRYSISTML NFGIFGVPMV
601: GSDICGFYPQ PTEELCNRWI EVGAFYPFSR DHANYYSPRQ ELYQWQSVAE SARNALGIRY KLLPFLYTLN YEAHVSGAPI ARPLFFSFPT YTECYGLSTQ
701: FLLGGSLMVS PVLEQGKTQV KSLFPPGSWY SLLDWTHTIT SKDGVYVTLD APLHVVNVHL YQNAILPMQQ GGMVSKEARM TPFTLIVTFP SGATQGEAKG
801: NIFVDDDELP DMNLGNGYST YVDLHATVDQ GAVKVWSEVQ EGKFALDKGW IIDSISVLGL EGSGAVSSLE IDGKPLMGGG SNVNVTTSAH EHLNNEGEGE
901: KKTVMVALRG LNIVVGKNFA MTWKMG
101: YNLLPREQPP PLSQSIGKSR KNPITVSQYS GSEFLFSYTS DPFSFAVKRK SNGETLFDTT SGDSDPFSSL VFKDQYLEIS TKLPKDASLY GLGENTQPHG
201: IKLYPSDPYT LYTTDISAIN LNADLYGSHP VYMDLRNAGG KASAHAVLLL NSNGMDVFYT GTSLTYKIIG GVFDFYFFSG PSPLNVVDQY TSLIGRPAPM
301: PYWAFGFHQC RWGYHNLSVV EDVVENYKKA QIPLDVIWND DDHMEGKKDF TLNPVNYPRP KLLKFLDKIH NFGMKYIVII DPGIAVNTSY GVYQRGIAND
401: VFIKYDGEPF LAQVWPGAVN FPDFLNPKTV SWWVDEIRRF HELVPVDGLW IDMNEVSNFC SGKCKIPEGQ CPTGTGPGWI CCLDCKNITK TRWDDPPYKI
501: NASGIKAPIG FKTIATSAYH YNGVLEYDAH SLYGFSQSVA THKGLQGLQG KRPFILSRST YVGSGKYAAH WTGDNQGTWE NLRYSISTML NFGIFGVPMV
601: GSDICGFYPQ PTEELCNRWI EVGAFYPFSR DHANYYSPRQ ELYQWQSVAE SARNALGIRY KLLPFLYTLN YEAHVSGAPI ARPLFFSFPT YTECYGLSTQ
701: FLLGGSLMVS PVLEQGKTQV KSLFPPGSWY SLLDWTHTIT SKDGVYVTLD APLHVVNVHL YQNAILPMQQ GGMVSKEARM TPFTLIVTFP SGATQGEAKG
801: NIFVDDDELP DMNLGNGYST YVDLHATVDQ GAVKVWSEVQ EGKFALDKGW IIDSISVLGL EGSGAVSSLE IDGKPLMGGG SNVNVTTSAH EHLNNEGEGE
901: KKTVMVALRG LNIVVGKNFA MTWKMG
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Arabidopsis Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.