Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G038060.2 | Barley | plastid | 92.05 | 14.59 |
| HORVU2Hr1G120870.1 | Barley | mitochondrion | 21.59 | 2.77 |
| HORVU2Hr1G120920.3 | Barley | endoplasmic reticulum, extracellular, vacuole | 22.73 | 2.29 |
| HORVU2Hr1G120880.1 | Barley | mitochondrion | 22.73 | 2.17 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 21.59 | 1.99 |
| HORVU7Hr1G106540.2 | Barley | cytosol | 20.45 | 1.93 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 2.27 | 1.89 |
| HORVU4Hr1G067520.2 | Barley | plasma membrane, vacuole | 17.05 | 1.64 |
| HORVU7Hr1G028010.9 | Barley | plastid | 13.64 | 1.13 |
| HORVU1Hr1G057330.1 | Barley | cytosol, mitochondrion | 13.64 | 1.1 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G023750.2 | EnsemblPlantsGene:HORVU4Hr1G023750 | Gene3D:2.60.40.1760 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF91 | UniParc:UPI000B47DAA1 |
| UniProt:A0A287NJZ4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:131733272..131734217
Molecular Weight (calculated)
9745.6 Da
IEP (calculated)
8.417
GRAVY (calculated)
-0.277
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MLRCGVQLVA IFSRSGGNWS TTYAPSPFYM TSKMRSLYLE GYDYSIFDLT KPDRVQIQVY GNSVQGRILE GESPTELITS YTGSTGRX
001: MIQFLKEKKF EQVIPPAKVE DANNITSEIA TNALRKGVNF LSALQASDGH WPAENAGPLF FLPPLVFCLY VTGHLHEIFT QDHRREVLRY IYCHQNEDGG
101: WGLHIEGNST MFCTTLNYIC MRILGEGPNG GPGNACKRAR DWILDHGGAT YIPSWGKTWL SILGVFDWSG SNPMPPEFWI LPSFLPIHPA KMWCYCRLVY
201: MPMSYLYGKR FVGPISPLIL QLREEIYLQP YAKINWNRAR HLCAKEDAYC PHPQIQDVIW NCLYIFTEPF LACWPFNKLL REKALGVAMK HIHYEDENSR
301: YITIGCVEKA LCMLACWVED PNGIHFKKHL LRISDYLWIA EDGMKMQSFG SQLWDSGFAL QALVASNLVN EIPDVLRRGY DFLKNSQVRE NPSGDFTNMY
401: RHISKGSWTF SDRDHGWQAS DCTAESFKCC LLLSMIPPDI VGPKMDPEQL YEAVTILLSL QSKNGGVTAW EPARGQEWLE LLNPTEVFAD IVVEHEYNEC
501: TSSAIQALIL FKQLYPNHRT EEINTSIKKA VQYIESIQML DGSWYGSWGV CFTYSTWFGL GGLAAAGKTY NNCLAMRKGV HFLLTTQKDN GGWGESYLSC
601: PKKVIIIAM
101: WGLHIEGNST MFCTTLNYIC MRILGEGPNG GPGNACKRAR DWILDHGGAT YIPSWGKTWL SILGVFDWSG SNPMPPEFWI LPSFLPIHPA KMWCYCRLVY
201: MPMSYLYGKR FVGPISPLIL QLREEIYLQP YAKINWNRAR HLCAKEDAYC PHPQIQDVIW NCLYIFTEPF LACWPFNKLL REKALGVAMK HIHYEDENSR
301: YITIGCVEKA LCMLACWVED PNGIHFKKHL LRISDYLWIA EDGMKMQSFG SQLWDSGFAL QALVASNLVN EIPDVLRRGY DFLKNSQVRE NPSGDFTNMY
401: RHISKGSWTF SDRDHGWQAS DCTAESFKCC LLLSMIPPDI VGPKMDPEQL YEAVTILLSL QSKNGGVTAW EPARGQEWLE LLNPTEVFAD IVVEHEYNEC
501: TSSAIQALIL FKQLYPNHRT EEINTSIKKA VQYIESIQML DGSWYGSWGV CFTYSTWFGL GGLAAAGKTY NNCLAMRKGV HFLLTTQKDN GGWGESYLSC
601: PKKVIIIAM
Arabidopsis Description
CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.