Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G251000.1 | Wheat | plastid | 90.52 | 94.62 |
| TraesCS1D01G239100.1 | Wheat | golgi, plastid | 90.62 | 94.44 |
| TraesCS1A01G238900.1 | Wheat | plastid | 90.52 | 93.63 |
| KXG34976 | Sorghum | cytosol | 68.91 | 85.99 |
| Os07t0420700-01 | Rice | plasma membrane | 80.13 | 84.56 |
| Zm00001d019497_P004 | Maize | cytosol, nucleus, plastid | 72.77 | 79.82 |
| Zm00001d005453_P007 | Maize | plastid | 78.75 | 79.19 |
| HORVU7Hr1G028010.9 | Barley | plastid | 76.36 | 77.93 |
| VIT_02s0087g00050.t01 | Wine grape | cytosol | 18.31 | 74.53 |
| OQU88897 | Sorghum | mitochondrion | 49.77 | 71.66 |
| VIT_02s0033g01410.t01 | Wine grape | plastid | 64.21 | 66.04 |
| CDY56225 | Canola | plasma membrane, plastid, vacuole | 33.76 | 66.01 |
| Bra028332.1-P | Field mustard | cytosol, nucleus, peroxisome | 59.98 | 65.93 |
| GSMUA_Achr11P... | Banana | plastid | 67.71 | 64.79 |
| KRH62685 | Soybean | nucleus | 61.27 | 63.25 |
| Solyc08g075530.2.1 | Tomato | plastid | 62.19 | 63.24 |
| VIT_02s0087g00060.t01 | Wine grape | extracellular | 14.9 | 62.55 |
| AT3G23640.3 | Thale cress | plastid | 60.63 | 62.17 |
| Bra028330.1-P | Field mustard | cytosol | 50.87 | 61.58 |
| VIT_02s0087g00030.t01 | Wine grape | cytosol | 27.97 | 61.29 |
| CDY18102 | Canola | plastid | 59.06 | 60.11 |
| CDY60313 | Canola | golgi, vacuole | 59.52 | 58.08 |
| CDY71267 | Canola | plastid | 11.96 | 45.45 |
| HORVU2Hr1G120870.1 | Barley | mitochondrion | 19.14 | 30.28 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 2.94 | 30.19 |
| HORVU4Hr1G067520.2 | Barley | plasma membrane, vacuole | 21.34 | 25.36 |
| HORVU7Hr1G106540.2 | Barley | cytosol | 21.34 | 24.89 |
| HORVU2Hr1G120920.3 | Barley | endoplasmic reticulum, extracellular, vacuole | 19.69 | 24.46 |
| HORVU2Hr1G120880.1 | Barley | mitochondrion | 20.24 | 23.84 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 20.33 | 23.17 |
| HORVU4Hr1G023750.2 | Barley | mitochondrion | 1.1 | 13.64 |
| HORVU3Hr1G038060.2 | Barley | plastid | 4.6 | 9.01 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | MapMan:50.3.2 | UniProt:A0A287FRB0 | InterPro:DUF5110 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 |
| InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU1Hr1G057330 | EnsemblPlants:HORVU1Hr1G057330.1 |
| InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 | PFAM:PF17137 | ScanProsite:PS00129 | PANTHER:PTHR22762 |
| PANTHER:PTHR22762:SF120 | SUPFAM:SSF51445 | SUPFAM:SSF74650 | UniParc:UPI000B46F532 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:+:418988419..419013243
Molecular Weight (calculated)
120333.0 Da
IEP (calculated)
6.203
GRAVY (calculated)
-0.293
Length
1087 amino acids
Sequence
(BLAST)
(BLAST)
0001: RRARNAGATV PIPSDTWIQD KSRQALPVRI NYQIRNHASE RANRDRLHCT EEMLAPCTQR AAPPLLASHA HSHAHSYRGS PHAPRLPPLR CFRASPPPAA
0101: AAGVVATMAA PVGEMVWVRV LEEGVFRFDA SEGARSAAGP SLSFAEPRRR EEPREGGDRP AVVPACEVAG NVQKVVIKLP SGTSFYGTGE ASGPLERTGK
0201: RVFTWNTDAW GFGPGTTSLY QSHPWVLAVL PDGKAFGVLA DTTRRCEIDL RQECTMKFSA PSAYPVITFG PYNSPAEVMM SLSHAIGTVA MPPKWSLGYH
0301: QCRWSYDSSE KVLKVVRTFR EKGIPCDVIW MDIDYMDGFR CFTFDSNRFP DPKSMVDDLH SIGCKSIWML DPGIKKEEGY FVYESGSETD VWIKKEDDRP
0401: FIGEVWPGDC VFPDFTCERT RTWWATLVRD FVSNGVDGIW NDMNEPAVFK TTTKTMPESN IHRGDADIGG VQNHSYYHNV YGMLMARSTY EGMAMSSSDK
0501: RPFVLTRAGF IGSQRYAATW TGDNLSNWDH MHMSLPMVLQ LGLSGQPLSG PDIGGFAGNA TPKLFGRWMG VGALFPFSRG HSETGSIDHE PWSFGEECEE
0601: VCRLALLRRY RLLPHIYTLF YLSHKKGVPV AAPLFFADSH DPELRKIETS FLLGPLLICA STSPDKGAHE CAHKLPKGVW SRFDFGDSHP DLPVMYLQGG
0701: AILPVGLPIR HVGEASLEDD LSLLVSLDEN GKAEGVLFED AGDGYGFTQG NYLLTYYVAQ VHSSVVSVKV LKTEGSWNRP KRNLNISILL GGGAMINSHG
0801: VDGEDLHITM PSGSEVSNLV ATSELELKKR LEMISPIPDI DEPSGQEGAE LSKIPIDLKS GDWLLKVVPW IGGRIILMTH LPTDSQWLHS RIEINGYEEY
0901: SGTEYRSAGC TEEYKVVRRY LEQSGEEESI CLEGDIGGGL ILQRHISILQ DNPKVQINSS IEARSVGAGS GGFSRLVCLR VHPTFTLLHP TEVVVAFTAI
1001: NGSKQEFSPE SREVTLEGDL RPNGEWMLVD KCAGVSLVNS FDPSQVSKCL VHWGTGNLNM ELWSEERPVS KDTPLRICHQ YELRQTC
0101: AAGVVATMAA PVGEMVWVRV LEEGVFRFDA SEGARSAAGP SLSFAEPRRR EEPREGGDRP AVVPACEVAG NVQKVVIKLP SGTSFYGTGE ASGPLERTGK
0201: RVFTWNTDAW GFGPGTTSLY QSHPWVLAVL PDGKAFGVLA DTTRRCEIDL RQECTMKFSA PSAYPVITFG PYNSPAEVMM SLSHAIGTVA MPPKWSLGYH
0301: QCRWSYDSSE KVLKVVRTFR EKGIPCDVIW MDIDYMDGFR CFTFDSNRFP DPKSMVDDLH SIGCKSIWML DPGIKKEEGY FVYESGSETD VWIKKEDDRP
0401: FIGEVWPGDC VFPDFTCERT RTWWATLVRD FVSNGVDGIW NDMNEPAVFK TTTKTMPESN IHRGDADIGG VQNHSYYHNV YGMLMARSTY EGMAMSSSDK
0501: RPFVLTRAGF IGSQRYAATW TGDNLSNWDH MHMSLPMVLQ LGLSGQPLSG PDIGGFAGNA TPKLFGRWMG VGALFPFSRG HSETGSIDHE PWSFGEECEE
0601: VCRLALLRRY RLLPHIYTLF YLSHKKGVPV AAPLFFADSH DPELRKIETS FLLGPLLICA STSPDKGAHE CAHKLPKGVW SRFDFGDSHP DLPVMYLQGG
0701: AILPVGLPIR HVGEASLEDD LSLLVSLDEN GKAEGVLFED AGDGYGFTQG NYLLTYYVAQ VHSSVVSVKV LKTEGSWNRP KRNLNISILL GGGAMINSHG
0801: VDGEDLHITM PSGSEVSNLV ATSELELKKR LEMISPIPDI DEPSGQEGAE LSKIPIDLKS GDWLLKVVPW IGGRIILMTH LPTDSQWLHS RIEINGYEEY
0901: SGTEYRSAGC TEEYKVVRRY LEQSGEEESI CLEGDIGGGL ILQRHISILQ DNPKVQINSS IEARSVGAGS GGFSRLVCLR VHPTFTLLHP TEVVVAFTAI
1001: NGSKQEFSPE SREVTLEGDL RPNGEWMLVD KCAGVSLVNS FDPSQVSKCL VHWGTGNLNM ELWSEERPVS KDTPLRICHQ YELRQTC
0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP
Arabidopsis Description
HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.