Factsheet for Bra028332.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
extracellular 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56225	Canola	plasma membrane, plastid, vacuole	55.51	98.74
AT3G23640.3	Thale cress	plastid	89.28	83.3
Bra028330.1-P	Field mustard	cytosol	74.62	82.18
VIT_02s0087g00050.t01	Wine grape	cytosol	21.54	79.78
CDY71267	Canola	plastid	21.23	73.43
KXG34976	Sorghum	cytosol	60.67	68.89
KRH62685	Soybean	nucleus	72.5	68.09
Solyc08g075530.2.1	Tomato	plastid	72.3	66.88
TraesCS7A01G134500.1	Wheat	extracellular	65.72	66.19
TraesCS7B01G035700.1	Wheat	plasma membrane, vacuole	63.6	65.86
Zm00001d019497_P004	Maize	cytosol, nucleus, plastid	64.51	64.38
Os07t0420700-01	Rice	plasma membrane	66.84	64.17
TraesCS1B01G251000.1	Wheat	plastid	66.84	63.56
VIT_02s0087g00030.t01	Wine grape	cytosol	31.85	63.51
TraesCS1D01G239100.1	Wheat	golgi, plastid	66.63	63.18
TraesCS1A01G238900.1	Wheat	plastid	67.04	63.08
VIT_02s0087g00060.t01	Wine grape	extracellular	16.38	62.55
Os07t0421300-01	Rice	nucleus, plasma membrane, vacuole	61.27	61.84
Zm00001d005453_P007	Maize	plastid	67.54	61.79
TraesCS7D01G133900.2	Wheat	cytosol, nucleus, peroxisome, plastid	65.52	61.48
HORVU7Hr1G028010.9	Barley	plastid	65.52	60.85
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	65.93	59.98
GSMUA_Achr11P...	Banana	plastid	68.86	59.95
OQU88897	Sorghum	mitochondrion	43.17	56.56
Bra037754.1-P	Field mustard	vacuole	22.24	26.16
Bra024240.1-P	Field mustard	vacuole	23.36	25.08
Bra006111.1-P	Field mustard	extracellular, vacuole	21.54	23.91
Bra004319.1-P	Field mustard	extracellular, vacuole	20.32	21.71
Bra004031.1-P	Field mustard	extracellular, vacuole	20.22	21.64
Bra035407.1-P	Field mustard	extracellular, vacuole	20.02	21.36

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra028332	EnsemblPlants:Bra028332.1
EnsemblPlants:Bra028332.1-P	InterPro:DUF5110	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF
InterPro:IPR013780	UniProt:M4EHR7	PFAM:PF01055	PFAM:PF13802	PFAM:PF17137	ScanProsite:PS00129
PANTHER:PTHR22762	PANTHER:PTHR22762:SF120	SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI00025437D8	SEG:seg

Description

AT3G23640 (E=0.0) HGL1 | HGL1 (heteroglycan glucosidase 1); hydrolase, hydrolyzing O-glycosyl compounds

Coordinates

chrA01:-:18446026..18452752

Molecular Weight (calculated)

110291.0 Da

IEP (calculated)

5.219

GRAVY (calculated)

-0.291

Length

989 amino acids

Sequence
(BLAST)

001: MSVSGGDGSE TAPSDMIFGP ILEDGVFRFD CSVEHRKAAF PSVSFKNSKD REVPIPSHIV PAFTPTYSLL EEQQVVTFQF SPGTSFYGTG EVGGQLERTG
101: KRVFTWNTDA WGYGPGTTSL YQSHPWVLVV LPTGETLGVL ADTTRKCEID LRKEGVIRII SPPSYPIITF GPFSTPTAVL QSLSHAVGTV FMPPKWALGY
201: HQCRWSYMSG KRVAEIAQTF RDKKIPSDVI WMDIDYMDGF RCFTFDKERF PDPSALAKHL HNNGFKAIWM LDPGIKQEEG FDVYDSGSKN NVWVKGADGE
301: PFIGEVWPGP CVFPDYTNSK ARSWWANLVK DFISNGVDGI WNDMNEPAVF KVVTKTMPEN NIHRGDDELG GVQYHSHYHN VYGMLMARST YEGMELADKN
401: KRPFVLTRAG FIGSQRYAAT WTGDNLSTWE HLHMSISMVL QLGLSGQPLS GPDIGGFAGN ATPRLFGRWM GVGAMFPFCR GHSEAGTDDH EPWSFGEECE
501: EVCRAALKRR YQLLPHFYTL FYIAHTTGAP VATPIFFADP KDSRLRTIEN AFLLGSLLIQ ASTLSNQGSH ELQPIMPRGT WLRFDFEDSH PDLPTLYLQG
601: GSIIALGPPH LHVGESSLSD DLTLLVSLDE NGKAVGLLFE DDGDGYGYTE GRYLITHYIA ERQSSVVTVK ILKTEGEWER PKRRIHVQLL LGGGAMLDAW
701: GMDGETIQIK MPSESEVSAL ISTSNERFAL HMENTKLIPE KEVLHGQKGM ELSREPVELN SGDWKLNIVP WIGGRILSMT HVPSGVQWLH SRIEMNGYEE
801: YSGTEYRSAG CTEEYNVIER DLEQAGEDES LILEGDVGGG LVLRRKIAIP KDNPRVVQIA SSIEARSVGA GSGGFSRLVC LRVHPTFCLM HPTESFVSFT
901: SIDGTKHEVW PDSGEQLYEG NNLPHGEWML VDKSLNLGLV NRFDVSQVFK CVVHWDCGTV NLELWSEDRP VSKESPLKIE HEYEVASFS

Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)

0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP

Arabidopsis Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.