Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 5
- plasma membrane 3
- golgi 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60045 | Canola | cytosol, nucleus, vacuole | 68.01 | 89.24 |
| Bra024240.1-P | Field mustard | vacuole | 92.15 | 84.15 |
| AT5G63840.2 | Thale cress | plasma membrane, vacuole | 91.68 | 81.33 |
| VIT_05s0029g01090.t01 | Wine grape | endoplasmic reticulum, vacuole | 72.89 | 69.03 |
| KRH63987 | Soybean | endoplasmic reticulum | 73.25 | 67.4 |
| PGSC0003DMT400013692 | Potato | vacuole | 72.77 | 66.23 |
| GSMUA_Achr1P22850_001 | Banana | cytosol | 46.73 | 65.94 |
| Solyc04g049070.2.1 | Tomato | plastid | 71.94 | 65.69 |
| KRH53951 | Soybean | cytosol, nucleus, vacuole | 63.73 | 64.97 |
| Os03t0216600-01 | Rice | plastid | 64.21 | 62.65 |
| TraesCS4D01G244900.1 | Wheat | cytosol | 61.24 | 62.42 |
| TraesCS4B01G244500.1 | Wheat | golgi | 66.47 | 61.03 |
| HORVU4Hr1G067520.2 | Barley | plasma membrane, vacuole | 65.99 | 60.66 |
| Zm00001d028227_P007 | Maize | vacuole | 66.11 | 60.63 |
| EER95268 | Sorghum | vacuole | 65.87 | 60.41 |
| TraesCS4A01G066900.2 | Wheat | golgi | 65.76 | 60.24 |
| Zm00001d048080_P002 | Maize | plasma membrane | 65.04 | 59.78 |
| VIT_16s0039g01030.t01 | Wine grape | extracellular, plasma membrane | 74.08 | 52.22 |
| Bra006111.1-P | Field mustard | extracellular, vacuole | 25.21 | 23.79 |
| Bra004031.1-P | Field mustard | extracellular, vacuole | 25.45 | 23.16 |
| Bra035407.1-P | Field mustard | extracellular, vacuole | 25.21 | 22.87 |
| Bra004319.1-P | Field mustard | extracellular, vacuole | 25.09 | 22.79 |
| Bra028332.1-P | Field mustard | cytosol, nucleus, peroxisome | 26.16 | 22.24 |
| Bra028330.1-P | Field mustard | cytosol | 21.4 | 20.04 |
Protein Annotations
| MapMan:18.1.1.6.2.1 | Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | EnsemblPlantsGene:Bra037754 | EnsemblPlants:Bra037754.1 |
| EnsemblPlants:Bra037754.1-P | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | InterPro:Gal_mutarotase_sf_dom |
| InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 |
| UniProt:M4F9J1 | PFAM:PF01055 | PFAM:PF13802 | ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF54 |
| SUPFAM:SSF51011 | SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM | UniParc:UPI0002541A69 | SEG:seg |
Description
AT5G63840 (E=0.0) RSW3 | RSW3 (RADIAL SWELLING 3); glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds
Coordinates
chrA09:+:3408208..3411384
Molecular Weight (calculated)
95305.2 Da
IEP (calculated)
5.320
GRAVY (calculated)
-0.400
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSLLFTLSL LCFASQTSLS WKKEEFRTCD QTPFCKRARS RAPGTCSLIA TDVTISDGDL VAKLTPKDND DHINPLILSL SVYRNGIVRL RIDEDHSLNP
101: PKKRFRVPDV VVSELEAKKI RLEKFATEND PPSSVVHVGD GYEAVVRHEP FEVYVRERSG DRRRVVSLNS HGLFDFEQLG KKGEGDNWEE KFRTHTDSRP
201: FGSQSISFDV SFYDSSFVYG IPEHATSFAL KPTKGPGVEE SAEPYRLFNL DVFEYDHESP FGLYGSIPFM VSHGGTGKSS GFFWLNAAEM QIDVLAEGWD
301: AESGGGDSRI NTLWMSEAGI VDTFFFVGPE PKDVVRQYAS VTGTSAMPQL FATGYHQCRW NYKDEEDVAQ VDSKFDEYDI PYDVLWLDIE HTDGKRYFTW
401: DSALFPNPEE MQKKLDVKGR RMVTIVDPHI KRDDSYFLHK EATEMGYYVK DSSGKDFDGW CWPGSSSYID MLSPEIREWW GGRFSYKNYV GSTPSLYIWN
501: DMNEPSVFNG PEVTMPRDAL HVGGVEHREV HNAYGYYFHM ATSDGLVMRG EGKDRPFVLS RAIFPGTQRY GAIWTGDNTA EWEHLRVSIP MLLTLGLTGI
601: TFSGADIGGF FGNPEPELLV RWYQVGAYYP FFRGHAHHDT KRREPWLFGE RNTELMRDAI HTRYTLLPYF YTLFREANVT GVPVLRPLWM EFPQDEATFS
701: NDEAFMVGNG LLVQGVYTKV VALNSSQEAD GELYIDDGKS FEFKRGAYIH RRFVFSNGVL TSTNIAPPEA SLSSQCLIDR IILLGHSSGP NSALVEPLNQ
801: KAEIEMGPLR MGGLVASSGT RVLTIRKPGV RVDQDWTIKI L
101: PKKRFRVPDV VVSELEAKKI RLEKFATEND PPSSVVHVGD GYEAVVRHEP FEVYVRERSG DRRRVVSLNS HGLFDFEQLG KKGEGDNWEE KFRTHTDSRP
201: FGSQSISFDV SFYDSSFVYG IPEHATSFAL KPTKGPGVEE SAEPYRLFNL DVFEYDHESP FGLYGSIPFM VSHGGTGKSS GFFWLNAAEM QIDVLAEGWD
301: AESGGGDSRI NTLWMSEAGI VDTFFFVGPE PKDVVRQYAS VTGTSAMPQL FATGYHQCRW NYKDEEDVAQ VDSKFDEYDI PYDVLWLDIE HTDGKRYFTW
401: DSALFPNPEE MQKKLDVKGR RMVTIVDPHI KRDDSYFLHK EATEMGYYVK DSSGKDFDGW CWPGSSSYID MLSPEIREWW GGRFSYKNYV GSTPSLYIWN
501: DMNEPSVFNG PEVTMPRDAL HVGGVEHREV HNAYGYYFHM ATSDGLVMRG EGKDRPFVLS RAIFPGTQRY GAIWTGDNTA EWEHLRVSIP MLLTLGLTGI
601: TFSGADIGGF FGNPEPELLV RWYQVGAYYP FFRGHAHHDT KRREPWLFGE RNTELMRDAI HTRYTLLPYF YTLFREANVT GVPVLRPLWM EFPQDEATFS
701: NDEAFMVGNG LLVQGVYTKV VALNSSQEAD GELYIDDGKS FEFKRGAYIH RRFVFSNGVL TSTNIAPPEA SLSSQCLIDR IILLGHSSGP NSALVEPLNQ
801: KAEIEMGPLR MGGLVASSGT RVLTIRKPGV RVDQDWTIKI L
001: MRSLLFVLSL ICFCSQTALS WKKEEFRSCD QTPFCKRARS RTPGACSLIV GDVSITDGDL VAKLLPKAPN QGDGDQIKPL ILSLSVYKDG IVRLKIDEDH
101: SLNPPKKRFQ VPDVVVSEFE EKKIWLQKVA TETISGDTSP SSVVYVSDGY EAVVRHDPFE VYVREKSGDR RRVVSLNSHG LFDFEQLGRK TEGDNWEEKF
201: RTHTDSRPSG PQSISFDVSF YDSSFVYGIP EHATSFALKP TKGPGVEESE PYRLFNLDVF EYDHESPFGL YGSIPFMVSH GKSGKTSGFF WLNAAEMQID
301: VLANGWDAES GISLPSSHSR IDTFWMSEAG IVDTFFFVGP EPKDVVKQYA SVTGTSAMPQ LFATGYHQCR WNYKDEEDVA QVDSKFDEHD IPYDVLWLDI
401: EHTDGKRYFT WDSVLFPHPE EMQKKLAAKG RKMVTIVDPH IKRDDSYFLH KEATQMGYYV KDSSGKDFDG WCWPGSSSYI DMLSPEIRKW WGGRFSYKNY
501: VGSTPSLYTW NDMNEPSVFN GPEVTMPRDA LHVGGVEHRE VHNAYGYYFH MATSDGLVMR EEGKDRPFVL SRAIFPGTQR YGAIWTGDNT AEWEHLRVSI
601: PMILTLGLTG ITFSGADIGG FFGNPEPELL VRWYQVGAYY PFFRGHAHHD TKRREPWLFG ERNTELMRDA IHTRYTLLPY FYTLFREANV TGVPVVRPLW
701: MEFPQDEATF SNDEAFMVGS GLLVQGVYTK GTTQASVYLP GKESWYDLRN GKTYVGGKTH KMDAPEESIP AFQKAGTIIP RKDRFRRSSS QMDNDPYTLV
801: VALNSSQEAE GELYIDDGKS FEFRRGSYIH RRFVFSKGVL TSTNLAPPEA RLSSQCLIDR IILLGHSSGP KSALVEPLNQ KAEIEMGPLR MGGLVASSGT
901: KVLTIRKPGV RVDQDWTVKI L
101: SLNPPKKRFQ VPDVVVSEFE EKKIWLQKVA TETISGDTSP SSVVYVSDGY EAVVRHDPFE VYVREKSGDR RRVVSLNSHG LFDFEQLGRK TEGDNWEEKF
201: RTHTDSRPSG PQSISFDVSF YDSSFVYGIP EHATSFALKP TKGPGVEESE PYRLFNLDVF EYDHESPFGL YGSIPFMVSH GKSGKTSGFF WLNAAEMQID
301: VLANGWDAES GISLPSSHSR IDTFWMSEAG IVDTFFFVGP EPKDVVKQYA SVTGTSAMPQ LFATGYHQCR WNYKDEEDVA QVDSKFDEHD IPYDVLWLDI
401: EHTDGKRYFT WDSVLFPHPE EMQKKLAAKG RKMVTIVDPH IKRDDSYFLH KEATQMGYYV KDSSGKDFDG WCWPGSSSYI DMLSPEIRKW WGGRFSYKNY
501: VGSTPSLYTW NDMNEPSVFN GPEVTMPRDA LHVGGVEHRE VHNAYGYYFH MATSDGLVMR EEGKDRPFVL SRAIFPGTQR YGAIWTGDNT AEWEHLRVSI
601: PMILTLGLTG ITFSGADIGG FFGNPEPELL VRWYQVGAYY PFFRGHAHHD TKRREPWLFG ERNTELMRDA IHTRYTLLPY FYTLFREANV TGVPVVRPLW
701: MEFPQDEATF SNDEAFMVGS GLLVQGVYTK GTTQASVYLP GKESWYDLRN GKTYVGGKTH KMDAPEESIP AFQKAGTIIP RKDRFRRSSS QMDNDPYTLV
801: VALNSSQEAE GELYIDDGKS FEFRRGSYIH RRFVFSKGVL TSTNLAPPEA RLSSQCLIDR IILLGHSSGP KSALVEPLNQ KAEIEMGPLR MGGLVASSGT
901: KVLTIRKPGV RVDQDWTVKI L
Arabidopsis Description
RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.