Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g049070.2.1 | Tomato | plastid | 97.19 | 97.5 |
| VIT_05s0029g01090.t01 | Wine grape | endoplasmic reticulum, vacuole | 73.48 | 76.46 |
| CDX81200 | Canola | vacuole | 52.92 | 76.29 |
| CDY60045 | Canola | cytosol, nucleus, vacuole | 52.49 | 75.66 |
| CDX84449 | Canola | vacuole | 52.49 | 75.19 |
| GSMUA_Achr1P22850_001 | Banana | cytosol | 48.38 | 75.0 |
| CDY43760 | Canola | vacuole | 52.27 | 74.88 |
| KRH63987 | Soybean | endoplasmic reticulum | 73.16 | 73.96 |
| Bra024240.1-P | Field mustard | vacuole | 72.73 | 72.96 |
| Bra037754.1-P | Field mustard | vacuole | 66.23 | 72.77 |
| KRH53951 | Soybean | cytosol, nucleus, vacuole | 64.07 | 71.76 |
| TraesCS4D01G244900.1 | Wheat | cytosol | 63.53 | 71.15 |
| AT5G63840.2 | Thale cress | plasma membrane, vacuole | 72.94 | 71.1 |
| Os03t0216600-01 | Rice | plastid | 65.26 | 69.95 |
| TraesCS4B01G244500.1 | Wheat | golgi | 67.86 | 68.45 |
| EER95268 | Sorghum | vacuole | 67.53 | 68.05 |
| HORVU4Hr1G067520.2 | Barley | plasma membrane, vacuole | 67.21 | 67.87 |
| TraesCS4A01G066900.2 | Wheat | golgi | 67.42 | 67.86 |
| Zm00001d028227_P007 | Maize | vacuole | 67.21 | 67.72 |
| Zm00001d048080_P002 | Maize | plasma membrane | 66.99 | 67.65 |
| VIT_16s0039g01030.t01 | Wine grape | extracellular, plasma membrane | 75.0 | 58.09 |
| PGSC0003DMT400041356 | Potato | extracellular, vacuole | 26.19 | 27.01 |
| PGSC0003DMT400041054 | Potato | endoplasmic reticulum, extracellular, vacuole | 24.89 | 24.73 |
| PGSC0003DMT400037696 | Potato | extracellular | 24.68 | 24.57 |
| PGSC0003DMT400021511 | Potato | cytosol, mitochondrion, nucleus | 12.99 | 14.17 |
Protein Annotations
| MapMan:18.1.1.6.2.1 | Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | GO:GO:0000023 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004558 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0032450 |
| GO:GO:0090599 | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | UniProt:M1A379 | PFAM:PF01055 | PFAM:PF13802 | EnsemblPlantsGene:PGSC0003DMG400005353 |
| PGSC:PGSC0003DMG400005353 | EnsemblPlants:PGSC0003DMT400013692 | ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF54 | SUPFAM:SSF51011 |
| SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0002958B8B | SEG:seg |
Description
Alpha-glucosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400005353]
Coordinates
chr4:-:30714759..30722601
Molecular Weight (calculated)
105630.0 Da
IEP (calculated)
5.916
GRAVY (calculated)
-0.502
Length
924 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAPLLLYPL LLLLLFVTSA YSWKKEEFRN CDQTPFCKRA RSRKPGSCNL RVADVSISDG DLIAKLVPKE ENPESEQPNK PLVLTLSVYQ DGVMRVKIDE
101: DQNLNPPKKR FEVPEVIEED FLNTKLWLTR VKEEQIDGVS SFSSVFYLSD GYEGVLRHDP FEVFARESGS GKRVLSINSN GLFDFEQLRE KKEGDDWEEK
201: FRSHTDTRPY GPQSISFDVS FYGADFVYGI PEHATSFALK PTKGPNVEEY SEPYRLFNLD VFEYLHESPF GLYGSIPFMI SHGKARGSSG FFWLNAAEMQ
301: IDVLGSGWNS NESSKIMLPS DKHRIDTLWM SESGVVDTFF FIGPGPKDVV RQYTSVTGRP SMPQLFATAY HQCRWNYRDE EDVYNVDSKF DEHDIPYDVL
401: WLDIEHTDGK KYFTWDRVLF PNPEEMQKKL AAKGRHMVTI VDPHIKRDES YHIHKEASEK GYYVKDATGK DYDGWCWPGS SSYTDLLNPE IRSWWSDKFS
501: LDSYVGSTKY LYIWNDMNEP SVFNGPEVTM PRDALHHGGV EHRELHNSYG YYFHMATSDG LLKRGDGKDR PFVLARAFFA GSQRYGAIWT GDNTAEWEHL
601: RVSVPMVLTL SISGIVFSGA DVGGFFGNPD IELLVRWYQV GAYYPFFRGH AHHDTKRREP WLFGERNTQL MREAIHVRYM YLPYFYTLFR EANSSGTPVA
701: RPLWMEFPGD EKSFSNDEAF MVGNGLLVQG VYTEKAKHVS VYLPGEESWY DLRSASAYNG GHTHKYEVSE DSIPSFQRAG TIIPRKDRLR RSSTQMENDP
801: YTLVIALNSS KAAEGELYID DGKSYEFKQG AFIHRRFTFS NGRLISSNAA PSTAGSDTFS SECTVERIIL LGLSPGAKTA LIEPGNKKVE IELGPLFIQG
901: IRGSVPTIRK PNVRITDDWS IQIL
101: DQNLNPPKKR FEVPEVIEED FLNTKLWLTR VKEEQIDGVS SFSSVFYLSD GYEGVLRHDP FEVFARESGS GKRVLSINSN GLFDFEQLRE KKEGDDWEEK
201: FRSHTDTRPY GPQSISFDVS FYGADFVYGI PEHATSFALK PTKGPNVEEY SEPYRLFNLD VFEYLHESPF GLYGSIPFMI SHGKARGSSG FFWLNAAEMQ
301: IDVLGSGWNS NESSKIMLPS DKHRIDTLWM SESGVVDTFF FIGPGPKDVV RQYTSVTGRP SMPQLFATAY HQCRWNYRDE EDVYNVDSKF DEHDIPYDVL
401: WLDIEHTDGK KYFTWDRVLF PNPEEMQKKL AAKGRHMVTI VDPHIKRDES YHIHKEASEK GYYVKDATGK DYDGWCWPGS SSYTDLLNPE IRSWWSDKFS
501: LDSYVGSTKY LYIWNDMNEP SVFNGPEVTM PRDALHHGGV EHRELHNSYG YYFHMATSDG LLKRGDGKDR PFVLARAFFA GSQRYGAIWT GDNTAEWEHL
601: RVSVPMVLTL SISGIVFSGA DVGGFFGNPD IELLVRWYQV GAYYPFFRGH AHHDTKRREP WLFGERNTQL MREAIHVRYM YLPYFYTLFR EANSSGTPVA
701: RPLWMEFPGD EKSFSNDEAF MVGNGLLVQG VYTEKAKHVS VYLPGEESWY DLRSASAYNG GHTHKYEVSE DSIPSFQRAG TIIPRKDRLR RSSTQMENDP
801: YTLVIALNSS KAAEGELYID DGKSYEFKQG AFIHRRFTFS NGRLISSNAA PSTAGSDTFS SECTVERIIL LGLSPGAKTA LIEPGNKKVE IELGPLFIQG
901: IRGSVPTIRK PNVRITDDWS IQIL
001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL
Arabidopsis Description
RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [plasma membrane,vacuole]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.