Factsheet for VIT_05s0029g01090.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P22850_001	Banana	cytosol	51.01	76.01
CDX81200	Canola	vacuole	54.73	75.82
KRH63987	Soybean	endoplasmic reticulum	77.7	75.49
CDX84449	Canola	vacuole	54.73	75.35
CDY60045	Canola	cytosol, nucleus, vacuole	54.28	75.19
CDY43760	Canola	vacuole	54.62	75.19
KRH53951	Soybean	cytosol, nucleus, vacuole	68.69	73.94
PGSC0003DMT400013692	Potato	vacuole	76.46	73.48
Solyc04g049070.2.1	Tomato	plastid	75.9	73.18
Bra037754.1-P	Field mustard	vacuole	69.03	72.89
Bra024240.1-P	Field mustard	vacuole	75.56	72.86
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	96.17	71.58
AT5G63840.2	Thale cress	plasma membrane, vacuole	76.01	71.2
TraesCS4D01G244900.1	Wheat	cytosol	63.96	68.85
Os03t0216600-01	Rice	plastid	66.55	68.56
Zm00001d028227_P007	Maize	vacuole	68.92	66.74
TraesCS4B01G244500.1	Wheat	golgi	68.81	66.7
HORVU4Hr1G067520.2	Barley	plasma membrane, vacuole	68.69	66.67
EER95268	Sorghum	vacuole	68.81	66.63
Zm00001d048080_P002	Maize	plasma membrane	68.47	66.45
TraesCS4A01G066900.2	Wheat	golgi	68.24	66.01
VIT_02s0087g00050.t01	Wine grape	cytosol	11.26	37.45
VIT_10s0092g00250.t01	Wine grape	cytosol, extracellular, plastid	20.83	26.43
VIT_10s0092g00240.t01	Wine grape	golgi, vacuole	25.68	25.17
VIT_01s0011g03450.t01	Wine grape	extracellular	25.0	24.03
VIT_02s0087g00060.t01	Wine grape	extracellular	6.76	23.17
VIT_02s0033g01410.t01	Wine grape	plastid	24.44	20.53
VIT_10s0092g00260.t01	Wine grape	extracellular, golgi	4.95	17.96
VIT_08s0007g05100.t01	Wine grape	plastid	13.74	14.01
VIT_02s0087g00030.t01	Wine grape	cytosol	5.97	10.69

Protein Annotations

MapMan:18.1.1.6.2.1	Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	ProteinID:CCB44281	ProteinID:CCB44281.1
UniProt:F6GWJ7	EMBL:FN594958	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	PFAM:PF01055	PFAM:PF13802	ScanProsite:PS00129	ScanProsite:PS00707
PANTHER:PTHR22762	PANTHER:PTHR22762:SF54	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650	SignalP:SignalP-noTM
UniParc:UPI00021080C4	ArrayExpress:VIT_05s0029g01090	EnsemblPlantsGene:VIT_05s0029g01090	EnsemblPlants:VIT_05s0029g01090.t01	SEG:seg	:

Description

No Description!

Coordinates

chr5:-:16908331..16927837

Molecular Weight (calculated)

101205.0 Da

IEP (calculated)

6.028

GRAVY (calculated)

-0.441

Length

888 amino acids

Sequence
(BLAST)

001: MAPNINPTLP LLLLLLLFTL HLSSVSAWKK EEFRTCNQTP FCKRARSRKP HSSSLFATDV AILDGALTAN LRQPPPESPD QDQIKPLLFT LSVNQNGVVR
101: VKIDEDPSLD PPKKRFEVPD VVLPEFESTK LWLQRFQTET VDGDSGPSSV VYVADGYEAV LRHNPFEVYV REKQGKRRVL SLNSHGLFDF EQLRVKQEGD
201: DWEERFKGHT DVRPYGPQSI SFDVSFFDAD FVYGIPEHAS SFALRPTRGP GVDDSEPYRL FNLDVFEYIH DSPFGLYGSI PFMLGHGKAR GTSGFFWLNA
301: AEMQIDVLGS GWDAESGILL PESGGRIDTL WMSEAGIVDT FFFIGPGPKD VVRQYTSVTG TPAMPQLFST AYHQCRWNYR DEEDVENVDS KFDEHDIPYD
401: VLWLDIEHTD GKRYFTWDRV LFPNPEQMQN KLAAKGRHMV TIVDPHIKRD ESFHLHKEAT SKGYYVKDAT GKDYDGWCWP GSSSYPDMLN PEIRSWWSEK
501: FSLKNYVGST PWLYIWNDMN EPSVFNGPEV TMPRDALHYG GVEHRELHNA YGYYFHMATS DGLVKRGDGK DRPFVLSRAF FSGSQRYGAV WTGDNTADWD
601: QLRVSVPMIL TLGLTGMTFS GADVGGFFGN PETELLVRWY QLGAYYPFFR AHAHHDTKRR EPWLFGERNT ELMRDAIHTR YALLPYFYTL FREANTSGVP
701: VMRPLWMEFP SDKATFSNDE AFMVGNSLLV QGIYTEQVKH ASVYLPGGQS WYDLRTGIIY KGGTAHKLEV SEETIPAFQR AGTIIPRKDR YRRSSTQMAN
801: DPYTLVIALN GSHAAEGELY IDDGKSFEFK QGAYIHRHFV FSDGKLTSSS LAEIELGPLW LRRGKSAPVL TIRRPNVPVA DDWTIKIL

Best Arabidopsis Sequence Match ( AT5G63840.2 )
(BLAST)

001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL

Arabidopsis Description

RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.