Factsheet for VIT_08s0007g05100.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66765	Soybean	plastid	73.36	72.78
PGSC0003DMT400021511	Potato	cytosol, mitochondrion, nucleus	69.46	71.43
Solyc03g094020.2.1	Tomato	extracellular	69.12	70.91
GSMUA_Achr9P17320_001	Banana	cytosol	65.21	64.55
TraesCS3A01G184900.1	Wheat	cytosol	43.51	55.33
TraesCS3D01G188900.1	Wheat	plastid	56.95	54.87
TraesCS3B01G214700.1	Wheat	plastid	56.83	54.64
KXG32241	Sorghum	mitochondrion, plastid	56.37	53.54
Zm00001d008273_P001	Maize	mitochondrion	55.45	53.37
Os01t0268600-01	Rice	plastid	55.34	51.72
HORVU3Hr1G038060.2	Barley	plastid	27.9	43.78
VIT_02s0087g00050.t01	Wine grape	cytosol	6.2	20.22
VIT_10s0092g00240.t01	Wine grape	golgi, vacuole	17.11	16.45
VIT_10s0092g00250.t01	Wine grape	cytosol, extracellular, plastid	13.09	16.29
VIT_10s0092g00260.t01	Wine grape	extracellular, golgi	4.02	14.29
VIT_01s0011g03450.t01	Wine grape	extracellular	15.04	14.18
VIT_05s0029g01090.t01	Wine grape	endoplasmic reticulum, vacuole	14.01	13.74
VIT_02s0087g00060.t01	Wine grape	extracellular	3.9	13.13
VIT_02s0033g01410.t01	Wine grape	plastid	13.32	10.97
VIT_16s0039g01030.t01	Wine grape	extracellular, plasma membrane	14.01	10.23
VIT_02s0087g00030.t01	Wine grape	cytosol	2.3	4.03

Protein Annotations

EntrezGene:100246895	wikigene:100246895	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:35.1	ProteinID:CCB55334
ProteinID:CCB55334.1	UniProt:F6HKB2	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100246895	wikigene:LOC100246895
PFAM:PF01055	PANTHER:PTHR22762	PANTHER:PTHR22762:SF91	SUPFAM:SSF51011	SUPFAM:SSF51445	SUPFAM:SSF74650
UniParc:UPI00015CD0F3	ArrayExpress:VIT_08s0007g05100	EnsemblPlantsGene:VIT_08s0007g05100	EnsemblPlants:VIT_08s0007g05100.t01	RefSeq:XP_002266626	RefSeq:XP_002266626.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:19019615..19024638

Molecular Weight (calculated)

99691.3 Da

IEP (calculated)

8.491

GRAVY (calculated)

-0.437

Length

871 amino acids

Sequence
(BLAST)

001: MAALKISKKH HKHLNNPFPS TPSSLPLLRG SLFFNPQTVP SDQTFIVGKD FQVLWSTDNG GSLSISHQSH PSRPIWSTVP GQAFVSAALA ETEVEESRGS
101: FAIKDGNVHL LCNDQTVEDI RLINENDCYL EANELDFLSG NQGLDQKPYL KDTQFPILLL TGWVFRKKKK SFQNTEIHER LQLEAERSTY ARYWVLFDQK
201: TSNQIGFQVK FGKPNFEFRS RAFATASRRF RGLKRKLRRT GRSRLGWCWS FSRPRGFVKV SSSEEEKEEK VAESIGFNRV CLTYSSEENE RFYGFGEQFS
301: HLNFKGKRIP IFVQEQGIGR GDQPITFAVN LVSYRAAGDS STTYAPSPHY LTSKMRSLYL EGYDYSVFDL TRKDRVQIQI HGDSVQGRIL HGNSPSELIE
401: RFTETIGRLP ELPEWIISGA VVGMQGGTDS VRQVWEKLQA HNTPVSAFWL QDWVGHRETL IGSQLWWNWE VDTARYWGWQ NLIKDLSAQH IKVMTYCNPC
501: LAPTNEKPNR RRDLFEEAKK LDILVKDKNG DTYMVPNTAF DVGMLDLTHP DTASWFKQIL QEMVDGGVRG WMADFGEGLP VDASLYSGED PIAAHNRYPE
601: LWAQMNREFV EEWKSAHSGK AREDPEEALV FFMRAGFRNS PKWGMLFWEG DQMVSWQAND GIKSAVVGLL SSGISGYAFN HSDIGGYCAV NLPVIKYRRS
701: EELLLRWMEV NAFTVVFRTH EGNKPSCNSQ FYSNHKTLAH FARFAKVYKA WKFYRVQLVK EAAQKGLPVC RHLFLHYPND EHVHKLSYQQ FLVGTEILVV
801: PVLDRGKKDV KAYFPVGESC SWQHIWTGKL FAKPGSEVWV EAPIGHPAIF VKEGSIIGET FLKNLREFNI L

Best Arabidopsis Sequence Match ( AT3G45940.1 )
(BLAST)

001: MASCLSLLVA IILCFSSLQC SNAIGKGYRL ISMEKSPDDG SFIGYLQVKQ SNKIYGSDIT ILRLFINYRT DHRLRVHITD AKKQRWEVPY NLLRREQPPN
101: VIGKSRKSPV TVQEISGPEL ILIFTVDPFS FAVRRRSNGE TIFNTSSSDE SFGEMVFKDQ YLEISTSLPK DASLYGFGEN SQANGIKLVP NEPYTLFTED
201: VSAFNLNTDL YGSHPVYMDL RNVSGKAYAH SVLLLNSHGM DVFYRGDSLT YKVIGGVFDF YFFAGPSPLN VVDQYTSLIG RPAPMPYWSL GFHQCRWGYR
301: NVSVVKDVVD NYQKAKIPLD VIWNDADYMD GYKDFTLDLV NFPHAKLLSF LDRIHKMGMK YVVIKDPGIG VNASYGVYQR GMASDVFIKY EGKPFLAQVW
401: PGPVYFPDFL NPKTVSWWGD EIRRFHELVP IDGLWIDMNE INATGHKASL GFKTIPTSAY HYNGVREYDA HSIYGFSEAI ATHKALLAVQ GKRPFILSRS
501: TFVGSGQYAA HWTGDNQGTW QSLQVSISTM LNFGIFGVPM VGSDICGFFP PTPEELCNRW IEVGAFYPFS RDHADYYAPR KELYQWGTVA ESARNALGMR
601: YKLLPFLYTL NYEAHMSGAP IARPLFFSFP EFTECYGLSK QFLLGSSLMI SPVLEQGKTQ VEALFPPGSW YHMFDMTQVV VSKNGRLFTL PAPFNVVNVH
701: LYQNAILPMQ QVVAFPAGAS EGYASGKLFL DDDELPEMKL GNGKSTYIDF YASVGNESVK IWSQVKEGQF ALSQGLVIEK VIVLGLKGTW KVSEILLNGS
801: SISNETKTIE VSSKEQMYVV GSEDEGESKS FMVELKGLEM LVGKDFNISW KMASTNVLSM AGNEVIAR

Arabidopsis Description

XYL2Putative alpha-xylosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4J6T7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.