Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 4
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G244500.1 | Wheat | golgi | 97.81 | 97.71 |
| TraesCS4D01G244900.1 | Wheat | cytosol | 87.76 | 97.33 |
| TraesCS4A01G066900.2 | Wheat | golgi | 96.83 | 96.51 |
| Os03t0216600-01 | Rice | plastid | 85.46 | 90.72 |
| EER95268 | Sorghum | vacuole | 88.63 | 88.44 |
| Zm00001d048080_P002 | Maize | plasma membrane | 87.54 | 87.54 |
| Zm00001d028227_P007 | Maize | vacuole | 87.65 | 87.46 |
| GSMUA_Achr1P22850_001 | Banana | cytosol | 51.48 | 79.03 |
| CDX81200 | Canola | vacuole | 50.16 | 71.61 |
| CDY60045 | Canola | cytosol, nucleus, vacuole | 50.05 | 71.45 |
| CDY43760 | Canola | vacuole | 49.73 | 70.54 |
| CDX84449 | Canola | vacuole | 49.29 | 69.92 |
| KRH63987 | Soybean | endoplasmic reticulum | 69.18 | 69.26 |
| VIT_05s0029g01090.t01 | Wine grape | endoplasmic reticulum, vacuole | 66.67 | 68.69 |
| KRH53951 | Soybean | cytosol, nucleus, vacuole | 61.75 | 68.48 |
| Solyc04g049070.2.1 | Tomato | plastid | 67.65 | 67.21 |
| PGSC0003DMT400013692 | Potato | vacuole | 67.87 | 67.21 |
| Bra037754.1-P | Field mustard | vacuole | 60.66 | 65.99 |
| Bra024240.1-P | Field mustard | vacuole | 65.14 | 64.71 |
| AT5G63840.2 | Thale cress | plasma membrane, vacuole | 65.79 | 63.5 |
| VIT_16s0039g01030.t01 | Wine grape | extracellular, plasma membrane | 66.89 | 51.3 |
| HORVU2Hr1G120870.1 | Barley | mitochondrion | 22.4 | 29.84 |
| HORVU2Hr1G120920.3 | Barley | endoplasmic reticulum, extracellular, vacuole | 25.03 | 26.17 |
| HORVU7Hr1G106540.2 | Barley | cytosol | 25.9 | 25.43 |
| HORVU2Hr1G120880.1 | Barley | mitochondrion | 25.57 | 25.35 |
| HORVU3Hr1G003540.2 | Barley | extracellular, vacuole | 26.34 | 25.26 |
| HORVU2Hr1G062940.1 | Barley | extracellular, plastid, vacuole | 2.84 | 24.53 |
| HORVU7Hr1G028010.9 | Barley | plastid | 25.68 | 22.07 |
| HORVU1Hr1G057330.1 | Barley | cytosol, mitochondrion | 25.36 | 21.34 |
| HORVU4Hr1G023750.2 | Barley | mitochondrion | 1.64 | 17.05 |
| HORVU3Hr1G038060.2 | Barley | plastid | 6.45 | 10.63 |
Protein Annotations
| MapMan:18.1.1.6.2.1 | Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | UniProt:A0A287PHD3 | InterPro:DUF5110 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005975 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009653 | GO:GO:0009826 | GO:GO:0009987 | GO:GO:0015926 | GO:GO:0016043 | GO:GO:0016049 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030244 | GO:GO:0030246 | GO:GO:0040007 | GO:GO:0042742 |
| GO:GO:0046686 | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b |
| InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU4Hr1G067520 | EnsemblPlants:HORVU4Hr1G067520.2 | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 |
| PFAM:PF17137 | ScanProsite:PS00129 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF54 | SUPFAM:SSF51011 | SUPFAM:SSF51445 |
| SUPFAM:SSF74650 | SignalP:SignalP-noTM | UniParc:UPI000B480180 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr4H:-:560337309..560341588
Molecular Weight (calculated)
102947.0 Da
IEP (calculated)
5.828
GRAVY (calculated)
-0.419
Length
915 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPPPLPRVL RLALLLLLAS PAALAWKKDE FRNCNQTPFC KRARTRAPHS LDAPLSLVAG SLAVSPEGSL TAELSHPSRP RPLLLRLSAL PPHALRLQID
101: EDYSANTPPS RRFHVPDVLL PDVDSRALHL SKPKTVGSVS TVALSSDLDV VVKHDPFELT VRRAGSGDPV LSFNSHGLFD FEPLQESKPE GETWEEQFRS
201: HTDTRPRGPQ SITFDVSFYG ADFVYGLPEH GSTELALRPT RGPGVEESEP YRLFNLDVFE YLHDSPFGLY GSIPFMIAHG ASASSGFFWL NAAEMQIDVL
301: APGWDGAASS ENGRIDTLWM AEAGVVDAFF FVGSKPKDVI KQYISVTGTP SMPQQFAVAY HQCRWNYRDE EDVGGVDAGF DEHDIPYDVL WLDIEHTDGK
401: RYFTWDRSTF PNPEEMQRKI ADKGRKMVTI VDPHMKRDSG YYLHEEATAK GYYVKDASGK DYDGWCWPGS SSYPDMLNPE IRDWWADKFS YQNYKGSTPT
501: LYIWNDMNEP SVFNGPEVTM PRDAIHNGDV EHRELHNAYG YYFHMATSDG LLKRGEGKDR PFVLSRAFFA GSQRYGAVWT GDNTADWDHL KSSIPMVLTL
601: GLTGMTFSGA DIGGFFGNPE PDLLVRWYQV GAFYPFFRGH AHHDTKRREP WLFGERRTAL MREAIHMRYS LLPYYYTLFQ EASVTGVPVM RPLWLEFPDD
701: KETYNNGEAF MVGASILAQG IYEEGQKSVS VYLPGTELWY DLRNGSPYKG SVSHKLQVSE DSIPSFQRSG TIVPRKDRFR RSSTQMVNDP YTLVIALNSS
801: GYAEGELYVD DGKSYDYQQG AFIHRRFVFA DNKLTSINIA PDSLTKKVYS TECVIERIIV LGLPSGAKKA IIEPGNQEVE IDLGPISLRS GSKSVAPTVR
901: RPNVRVVDDW TIRIA
101: EDYSANTPPS RRFHVPDVLL PDVDSRALHL SKPKTVGSVS TVALSSDLDV VVKHDPFELT VRRAGSGDPV LSFNSHGLFD FEPLQESKPE GETWEEQFRS
201: HTDTRPRGPQ SITFDVSFYG ADFVYGLPEH GSTELALRPT RGPGVEESEP YRLFNLDVFE YLHDSPFGLY GSIPFMIAHG ASASSGFFWL NAAEMQIDVL
301: APGWDGAASS ENGRIDTLWM AEAGVVDAFF FVGSKPKDVI KQYISVTGTP SMPQQFAVAY HQCRWNYRDE EDVGGVDAGF DEHDIPYDVL WLDIEHTDGK
401: RYFTWDRSTF PNPEEMQRKI ADKGRKMVTI VDPHMKRDSG YYLHEEATAK GYYVKDASGK DYDGWCWPGS SSYPDMLNPE IRDWWADKFS YQNYKGSTPT
501: LYIWNDMNEP SVFNGPEVTM PRDAIHNGDV EHRELHNAYG YYFHMATSDG LLKRGEGKDR PFVLSRAFFA GSQRYGAVWT GDNTADWDHL KSSIPMVLTL
601: GLTGMTFSGA DIGGFFGNPE PDLLVRWYQV GAFYPFFRGH AHHDTKRREP WLFGERRTAL MREAIHMRYS LLPYYYTLFQ EASVTGVPVM RPLWLEFPDD
701: KETYNNGEAF MVGASILAQG IYEEGQKSVS VYLPGTELWY DLRNGSPYKG SVSHKLQVSE DSIPSFQRSG TIVPRKDRFR RSSTQMVNDP YTLVIALNSS
801: GYAEGELYVD DGKSYDYQQG AFIHRRFVFA DNKLTSINIA PDSLTKKVYS TECVIERIIV LGLPSGAKKA IIEPGNQEVE IDLGPISLRS GSKSVAPTVR
901: RPNVRVVDDW TIRIA
001: MIVFLSVVFW LSSLLPQSKD FHEQGTKMRS LLFVLSLICF CSQTALSWKK EEFRSCDQTP FCKRARSRTP GACSLIVGDV SITDGDLVAK LLPKAPNQGD
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL
101: GDQIKPLILS LSVYKDGIVR LKIDEDHSLN PPKKRFQVPD VVVSEFEEKK IWLQKVATET ISGDTSPSSV VYVSDGYEAV VRHDPFEVYV REKSGDRRRV
201: VSLNSHGLFD FEQLGRKTEG DNWEEKFRTH TDSRPSGPQS ISFDVSFYDS SFVYGIPEHA TSFALKPTKG PGVEESEPYR LFNLDVFEYD HESPFGLYGS
301: IPFMVSHGKS GKTSGFFWLN AAEMQIDVLA NGWDAESGIS LPSSHSRIDT FWMSEAGIVD TFFFVGPEPK DVVKQYASVT GTSAMPQLFA TGYHQCRWNY
401: KDEEDVAQVD SKFDEHDIPY DVLWLDIEHT DGKRYFTWDS VLFPHPEEMQ KKLAAKGRKM VTIVDPHIKR DDSYFLHKEA TQMGYYVKDS SGKDFDGWCW
501: PGSSSYIDML SPEIRKWWGG RFSYKNYVGS TPSLYTWNDM NEPSVFNGPE VTMPRDALHV GGVEHREVHN AYGYYFHMAT SDGLVMREEG KDRPFVLSRA
601: IFPGTQRYGA IWTGDNTAEW EHLRVSIPMI LTLGLTGITF SGADIGGFFG NPEPELLVRW YQVGAYYPFF RGHAHHDTKR REPWLFGERN TELMRDAIHT
701: RYTLLPYFYT LFREANVTGV PVVRPLWMEF PQDEATFSND EAFMVGSGLL VQGVYTKGTT QASVYLPGKE SWYDLRNGKT YVGGKTHKMD APEESIPAFQ
801: KAGTIIPRKD RFRRSSSQMD NDPYTLVVAL NSSQEAEGEL YIDDGKSFEF RRGSYIHRRF VFSKGVLTST NLAPPEARLS SQCLIDRIIL LGHSSGPKSA
901: LVEPLNQKAE IEMGPLRMGG LVASSGTKVL TIRKPGVRVD QDWTVKIL
Arabidopsis Description
RSW3Glycosyl hydrolases family 31 protein [Source:TAIR;Acc:AT5G63840]
SUBAcon: [plasma membrane,vacuole]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.