Factsheet for PGSC0003DMT400041356

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
golgi 5
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g009630.2.1	Tomato	extracellular	69.31	95.69
VIT_10s0092g00250.t01	Wine grape	cytosol, extracellular, plastid	52.23	66.86
KRH11838	Soybean	vacuole	47.54	66.25
VIT_10s0092g00240.t01	Wine grape	golgi, vacuole	66.63	65.89
KRH11840	Soybean	cytosol, nucleus	33.71	63.98
KRH36850	Soybean	nucleus	63.73	63.66
Bra006111.1-P	Field mustard	extracellular, vacuole	62.83	63.19
CDX78437	Canola	extracellular, vacuole	62.83	63.12
AT5G11720.1	Thale cress	vacuole	63.5	63.08
CDX70414	Canola	extracellular, plastid, vacuole	62.83	62.69
KRH11839	Soybean	extracellular	63.73	60.94
OQU76881	Sorghum	extracellular, vacuole	53.35	56.97
TraesCS2A01G549800.1	Wheat	extracellular, vacuole	37.17	56.54
Os06t0675700-01	Rice	nucleus	54.91	55.59
Zm00001d036608_P003	Maize	extracellular	53.91	54.89
Os06t0676700-01	Rice	plastid	53.24	53.84
TraesCS7A01G464200.2	Wheat	endoplasmic reticulum	53.24	53.84
HORVU2Hr1G120870.1	Barley	mitochondrion	41.18	53.71
TraesCS2D01G550500.1	Wheat	golgi	51.23	53.19
TraesCS2A01G548500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.78	52.72
TraesCS2B01G580200.1	Wheat	endoplasmic reticulum	50.89	52.66
TraesCS2A01G549500.1	Wheat	golgi	50.67	52.61
TraesCS2A01G548900.1	Wheat	unclear	50.78	52.54
TraesCS2A01G548600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.56	52.49
TraesCS2D01G550600.1	Wheat	endoplasmic reticulum	50.67	52.42
TraesCS2D01G550400.1	Wheat	endoplasmic reticulum	50.67	52.42
TraesCS7B01G364700.1	Wheat	mitochondrion, plastid, vacuole	54.13	52.26
TraesCS2B01G580100.1	Wheat	endoplasmic reticulum	50.45	52.19
TraesCS2D01G550700.1	Wheat	cytosol, extracellular, vacuole	51.56	51.91
TraesCS7D01G451800.2	Wheat	unclear	54.02	51.88
HORVU2Hr1G120920.3	Barley	endoplasmic reticulum, extracellular, vacuole	50.56	51.77
TraesCS2B01G580300.1	Wheat	extracellular, plastid, vacuole	51.23	51.57
HORVU7Hr1G106540.2	Barley	cytosol	52.68	50.64
TraesCS2A01G549600.1	Wheat	extracellular, vacuole	43.64	50.45
TraesCS2A01G548700.1	Wheat	mitochondrion	43.64	49.94
HORVU2Hr1G120880.1	Barley	mitochondrion	51.12	49.62
VIT_10s0092g00260.t01	Wine grape	extracellular, golgi	13.5	49.39
GSMUA_Achr3P23330_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	8.15	45.62
TraesCS2A01G549700.1	Wheat	cytosol, extracellular, vacuole	12.39	44.05
PGSC0003DMT400037696	Potato	extracellular	45.31	43.75
PGSC0003DMT400041054	Potato	endoplasmic reticulum, extracellular, vacuole	45.31	43.66
PGSC0003DMT400013692	Potato	vacuole	27.01	26.19
PGSC0003DMT400021511	Potato	cytosol, mitochondrion, nucleus	15.29	16.17

Protein Annotations

EntrezGene:102581005	Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	GO:GO:0030312	GO:GO:0048046	InterPro:Gal_mutarotase_N	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31
InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_CS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
UniProt:M1BB96	PFAM:PF01055	PFAM:PF13802	PFAM:PF16863	EnsemblPlantsGene:PGSC0003DMG400016018	PGSC:PGSC0003DMG400016018
EnsemblPlants:PGSC0003DMT400041356	ScanProsite:PS00129	ScanProsite:PS00707	PANTHER:PTHR22762	PANTHER:PTHR22762:SF121	SUPFAM:SSF51011
SUPFAM:SSF51445	SUPFAM:SSF74650	TMHMM:TMhelix	UniParc:UPI000294E890	RefSeq:XP_006359350.1	SEG:seg

Description

Alpha-glucosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400016018]

Coordinates

chr4:+:5258251..5264186

Molecular Weight (calculated)

101138.0 Da

IEP (calculated)

6.777

GRAVY (calculated)

-0.173

Length

896 amino acids

Sequence
(BLAST)

001: MNNHTTNKFC IILIFSKYFI LFFTFLVPLL ALLTKSEQVG YGYIVRSVGV GSSGRTLTAY LQLIKSSSVF GTDIQNLTLT ACFETKDRLR VRITDADHER
101: WEVPREFIPR ETHLSPRSSL LEKRSSTSLP LSEDTHYFHT DTVSDLTFTL YNTTPFGFTI TRHSTGDVLF DTTPENDSPD TFLIFKDQYL QLSSSLPANR
201: SSIYGLGEHT KRNFKLKHNQ TLTLWNSDIS SANVDLNLYG SHPFYMDVRS HPGAGTSHGV LLFNSNGMDI VYAGDRITYK VIGGIIDLYF FAGPVPELVM
301: EQYTELIGRP APMPYWSFGF HQCRYGYKDI TEIKNVVAGY AKAQIPLEVM WTDIDHMDGY KDFTLDPINF PLDQMKKFVD TLHHNGQKFV LIVDPGISIN
401: SSYETYKRGM QADIFIKRDG VPYLGEVWPG KVYFPDFINP QGRVFWSNEI KIFHDLLPVD GLWLDMNELS NFISSPPSPS STLDNPPYKI NNSGSLRPIN
501: EKTVPATSVH FGNALEYNVH NLYGFLEAKT TNAALIDVTG KRPFILSRST FVGAGKYTAH WTGDNAATWD DLAYSIPGIL NSGLFGIPMV GADICGFGRN
601: TTEELCRRWI QLGAFYPFAR DHSDKFTIHQ ELYIWDSVAA TARKVLGLRY RLLPYFYTLM FEAHTKGVPI ARPLFFSFPE DTNTYAIDTQ FLIGKGLMIS
701: PVLTSGEVSV NAYFPSGTWF NLFNYSNYVN MKSGSYISLD APPDHINVHL REGNIVVMQG EAMTTRAARD TPFELVVAIN NRGNSSGEVF LDDGEDVEMG
801: GEGGKWCLVK FHTNVVNKKL YLRSNVVNEE FALSKNWTIH KVTFLGLKKG VSKINAYNLT TKIRTKNDKS AFGVLEMRDL SVLIGKEFTI ELTLEK

Best Arabidopsis Sequence Match ( AT5G11720.1 )
(BLAST)

001: MSSLHWFPNI FIVVVVFFSL RSSQVVLEEE ESTVVGYGYV VRSVGVDSNR QVLTAKLDLI KPSSVYAPDI KSLNLHVSLE TSERLRIRIT DSSQQRWEIP
101: ETVIPRAGNH SPRRFSTEED GGNSPENNFL ADPSSDLVFT LHNTTPFGFS VSRRSSGDIL FDTSPDSSDS NTYFIFKDQF LQLSSALPEN RSNLYGIGEH
201: TKRSFRLIPG ETMTLWNADI GSENPDVNLY GSHPFYMDVR GSKGNEEAGT THGVLLLNSN GMDVKYEGHR ITYNVIGGVI DLYVFAGPSP EMVMNQYTEL
301: IGRPAPMPYW SFGFHQCRYG YKNVSDLEYV VDGYAKAGIP LEVMWTDIDY MDGYKDFTLD PVNFPEDKMQ SFVDTLHKNG QKYVLILDPG IGVDSSYGTY
401: NRGMEADVFI KRNGEPYLGE VWPGKVYFPD FLNPAAATFW SNEIKMFQEI LPLDGLWIDM NELSNFITSP LSSGSSLDDP PYKINNSGDK RPINNKTVPA
501: TSIHFGNISE YDAHNLYGLL EAKATHQAVV DITGKRPFIL SRSTFVSSGK YTAHWTGDNA AKWEDLAYSI PGILNFGLFG IPMVGADICG FSHDTTEELC
601: RRWIQLGAFY PFARDHSSLG TARQELYLWD SVASSARKVL GLRMRLLPHL YTLMYEAHVS GNPIARPLFF SFPQDTKTYE IDSQFLIGKS IMVSPALKQG
701: AVAVDAYFPA GNWFDLFNYS FAVGGDSGKH VRLDTPADHV NVHVREGSIV AMQGEALTTR DARKTPYQLL VVASRLENIS GELFLDDGEN LRMGAGGGNR
801: DWTLVKFRCY VTGKSVVLRS EVVNPEYASK MKWSIGKVTF VGFENVENVK TYEVRTSERL RSPRISLIKT VSDNDDPRFL SVEVSKLSLL VGKKFEMRLR
901: LT

Arabidopsis Description

AT5g11720/T22P22_110 [Source:UniProtKB/TrEMBL;Acc:Q9LYF8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.