Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G451800.2 | Wheat | unclear | 94.81 | 90.03 |
| TraesCS7B01G364700.1 | Wheat | mitochondrion, plastid, vacuole | 90.63 | 86.53 |
| HORVU7Hr1G106540.2 | Barley | cytosol | 89.95 | 85.52 |
| Os06t0676700-01 | Rice | plastid | 75.39 | 75.39 |
| Os06t0675700-01 | Rice | nucleus | 75.17 | 75.25 |
| OQU76881 | Sorghum | extracellular, vacuole | 71.22 | 75.21 |
| Zm00001d036608_P003 | Maize | extracellular | 73.02 | 73.52 |
| TraesCS2A01G549800.1 | Wheat | extracellular, vacuole | 45.03 | 67.74 |
| TraesCS2A01G548900.1 | Wheat | unclear | 65.8 | 67.32 |
| TraesCS2A01G548500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 65.12 | 66.86 |
| TraesCS2A01G549500.1 | Wheat | golgi | 64.9 | 66.63 |
| TraesCS2A01G548600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 64.79 | 66.51 |
| GSMUA_Achr3P23340_001 | Banana | cytoskeleton, cytosol, peroxisome | 48.76 | 65.95 |
| TraesCS2A01G548700.1 | Wheat | mitochondrion | 57.56 | 65.13 |
| TraesCS2A01G549700.1 | Wheat | cytosol, extracellular, vacuole | 18.28 | 64.29 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 50.0 | 63.02 |
| TraesCS2A01G549600.1 | Wheat | extracellular, vacuole | 54.51 | 62.32 |
| Solyc04g009630.2.1 | Tomato | extracellular | 42.78 | 58.4 |
| KRH11838 | Soybean | vacuole | 40.52 | 55.83 |
| VIT_10s0092g00250.t01 | Wine grape | cytosol, extracellular, plastid | 44.02 | 55.71 |
| VIT_10s0092g00240.t01 | Wine grape | golgi, vacuole | 56.09 | 54.86 |
| KRH36850 | Soybean | nucleus | 55.19 | 54.52 |
| AT5G11720.1 | Thale cress | vacuole | 54.97 | 53.99 |
| Bra006111.1-P | Field mustard | extracellular, vacuole | 53.84 | 53.54 |
| CDX78437 | Canola | extracellular, vacuole | 53.72 | 53.36 |
| CDX70414 | Canola | extracellular, plastid, vacuole | 54.06 | 53.34 |
| PGSC0003DMT400041356 | Potato | extracellular, vacuole | 53.84 | 53.24 |
| Solyc02g069670.2.1 | Tomato | extracellular | 50.23 | 52.91 |
| KRH11840 | Soybean | cytosol, nucleus | 27.2 | 51.06 |
| KRH11839 | Soybean | extracellular | 53.72 | 50.8 |
| TraesCS3A01G042100.1 | Wheat | nucleus | 48.65 | 45.42 |
| VIT_10s0092g00260.t01 | Wine grape | extracellular, golgi | 11.29 | 40.82 |
| TraesCS4A01G066900.2 | Wheat | golgi | 27.09 | 26.14 |
| TraesCS7A01G134500.1 | Wheat | extracellular | 24.38 | 22.0 |
| TraesCS1A01G238900.1 | Wheat | plastid | 24.94 | 21.03 |
| TraesCS3A01G184900.1 | Wheat | cytosol | 13.66 | 17.66 |
Protein Annotations
| Gene3D:2.60.40.1180 | Gene3D:2.60.40.1760 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0030246 | InterPro:Gal_mutarotase_N | InterPro:Gal_mutarotase_sf_dom | InterPro:Glyco_hydro_31 | InterPro:Glyco_hydro_31_AS | InterPro:Glyco_hydro_31_CS |
| InterPro:Glyco_hydro_31_N_dom | InterPro:Glyco_hydro_b | InterPro:Glycoside_hydrolase_SF | InterPro:IPR013780 | PFAM:PF01055 | PFAM:PF13802 |
| PFAM:PF16863 | ScanProsite:PS00129 | ScanProsite:PS00707 | PANTHER:PTHR22762 | PANTHER:PTHR22762:SF126 | SUPFAM:SSF51011 |
| SUPFAM:SSF51445 | SUPFAM:SSF74650 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS7A01G464200 | EnsemblPlants:TraesCS7A01G464200.2 | TIGR:cd06602 |
| TIGR:cd14752 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:660542527..660545722
Molecular Weight (calculated)
96821.1 Da
IEP (calculated)
6.575
GRAVY (calculated)
-0.052
Length
886 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPSAPADC SPPLMILLLL LVFLPLAVSC GDDGSGGYDV VSLTQSGSAL SARLELVLAG ETPADAALGA GAQRLCLTAS LETDSRLRVR ITDGDRPRWE
101: VPQDIIPRPA PEDDLHNAPP ASSTPLQGSR VLSAAGSDLV LTVHASPFRF TVSRRSTGDV LFDTAPGLVF RDKYLEVTSA LPAGRASLYG LGEQTKGSFR
201: LRHNDTFTLW NADIGAAHVD VNLYGAHPFY MDVRPPGAAH GVLLLSSNGM DVLYGGSYVT YKVIGGVLDF YFFAGPSPLA VVDQYTQLIG RPAPMPYWSF
301: GFHQCRYGYL NVSDLERVVA GYAKARIPLE VMWTDIDYMD GFKDFTLDHV NFTAAELRPF VDRLHRNAQK YVLILDPGIR IDATYGTFVR GMQQDIFLKR
401: NGTNFLGNVW PGDVYFPDFM HPRAAEFWAR EISLFRRTIP VDGLWIDMNE ISNFYNPEPM NALDDPPYRI NNNGTHRPIN NKTVPASAVH YGGVTEYDAH
501: NLFGLLEARA THRALLRDTG RRPFVLSRST FVGSGRYTAH WTGDNAATWG DLRYSINTML SFGLFGMPMI GADICGFNGD TTEELCGRWI QLGAFYPFSR
601: DHSAIFTVRR ELYLWPSVAA SARKALGLRY QLLPYFYTLM YEAHTTGAPI ARPLFFSYPH DVATYGVDRQ FLLGRGVLVS PVLEPGATTV DAYFPAGRWF
701: SLYDHSLTVA TKTGEHVTLP APADTVNVHV AGGTILPLQQ SALTTSRARR TAFHLLVALA EDGTASGDLF LDDGESPEMG GRSDWSLVRF SCATGSDGSI
801: KVRSEVVHNS YAQTRTLVIS KVVLMGHRSP AAPKKLTVHV NGAEVEPSSP AGTRYQNAGG LGGVAHIGGL SLVVGEEFEL KVAVSY
101: VPQDIIPRPA PEDDLHNAPP ASSTPLQGSR VLSAAGSDLV LTVHASPFRF TVSRRSTGDV LFDTAPGLVF RDKYLEVTSA LPAGRASLYG LGEQTKGSFR
201: LRHNDTFTLW NADIGAAHVD VNLYGAHPFY MDVRPPGAAH GVLLLSSNGM DVLYGGSYVT YKVIGGVLDF YFFAGPSPLA VVDQYTQLIG RPAPMPYWSF
301: GFHQCRYGYL NVSDLERVVA GYAKARIPLE VMWTDIDYMD GFKDFTLDHV NFTAAELRPF VDRLHRNAQK YVLILDPGIR IDATYGTFVR GMQQDIFLKR
401: NGTNFLGNVW PGDVYFPDFM HPRAAEFWAR EISLFRRTIP VDGLWIDMNE ISNFYNPEPM NALDDPPYRI NNNGTHRPIN NKTVPASAVH YGGVTEYDAH
501: NLFGLLEARA THRALLRDTG RRPFVLSRST FVGSGRYTAH WTGDNAATWG DLRYSINTML SFGLFGMPMI GADICGFNGD TTEELCGRWI QLGAFYPFSR
601: DHSAIFTVRR ELYLWPSVAA SARKALGLRY QLLPYFYTLM YEAHTTGAPI ARPLFFSYPH DVATYGVDRQ FLLGRGVLVS PVLEPGATTV DAYFPAGRWF
701: SLYDHSLTVA TKTGEHVTLP APADTVNVHV AGGTILPLQQ SALTTSRARR TAFHLLVALA EDGTASGDLF LDDGESPEMG GRSDWSLVRF SCATGSDGSI
801: KVRSEVVHNS YAQTRTLVIS KVVLMGHRSP AAPKKLTVHV NGAEVEPSSP AGTRYQNAGG LGGVAHIGGL SLVVGEEFEL KVAVSY
001: MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
101: REQPPQVGKV IGKSRKSPIT VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL GENSQANGIK LVPNEPYTLY
201: TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW
301: GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA
401: QVWPGPVYFP DFLNPKTVSW WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT RWDDPPYKIN ATGVVAPVGF
501: KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP
601: TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP
701: VLEQGKTEVE ALFPPGSWYH MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA GASEGYATGK LYLDEDELPE
801: MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM
901: LVGKDFNMSW KMGIN
Arabidopsis Description
XYL1Alpha-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Y7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.