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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid

Predictor Summary:
  • plastid 7
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plastid
Any Predictor:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G251000.1 Wheat plastid 96.93 97.21
TraesCS1A01G238900.1 Wheat plastid 97.22 96.48
HORVU1Hr1G057330.1 Barley cytosol, mitochondrion 94.44 90.62
KXG34976 Sorghum cytosol 72.48 86.8
Os07t0420700-01 Rice plasma membrane 84.47 85.53
Zm00001d019497_P004 Maize cytosol, nucleus, plastid 76.7 80.73
Zm00001d005453_P007 Maize plastid 83.32 80.39
TraesCS7D01G133900.2 Wheat cytosol, nucleus, peroxisome, plastid 80.06 79.22
VIT_02s0087g00050.t01 Wine grape cytosol 19.18 74.91
OQU88897 Sorghum mitochondrion 52.25 72.19
VIT_02s0033g01410.t01 Wine grape plastid 67.59 66.7
Bra028332.1-P Field mustard cytosol, nucleus, peroxisome 63.18 66.63
CDY56225 Canola plasma membrane, plastid, vacuole 35.28 66.19
GSMUA_Achr11P... Banana plastid 70.76 64.96
KRH62685 Soybean nucleus 64.62 64.01
Solyc08g075530.2.1 Tomato plastid 65.1 63.52
AT3G23640.3 Thale cress plastid 64.14 63.11
VIT_02s0087g00060.t01 Wine grape extracellular 15.53 62.55
Bra028330.1-P Field mustard cytosol 53.79 62.47
VIT_02s0087g00030.t01 Wine grape cytosol 29.34 61.69
CDY18102 Canola plastid 62.8 61.33
CDY60313 Canola golgi, vacuole 62.8 58.8
CDY71267 Canola plastid 12.85 46.85
TraesCS4D01G244900.1 Wheat cytosol 21.28 26.91
TraesCS2D01G550400.1 Wheat endoplasmic reticulum 20.81 25.06
TraesCS2D01G550500.1 Wheat golgi 20.61 24.91
TraesCS2D01G550600.1 Wheat endoplasmic reticulum 20.61 24.83
TraesCS2D01G550700.1 Wheat cytosol, extracellular, vacuole 20.61 24.16
TraesCS7D01G451800.2 Wheat unclear 21.19 23.69
TraesCS3D01G038300.1 Wheat golgi 21.28 23.42
TraesCS3D01G188900.1 Wheat plastid 11.79 13.61
Protein Annotations
Gene3D:2.60.40.1180Gene3D:2.60.40.1760Gene3D:3.20.20.80MapMan:50.3.2GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0030246InterPro:Gal_mutarotase_sf_domInterPro:Glyco_hydro_31InterPro:Glyco_hydro_31_ASInterPro:Glyco_hydro_31_N_domInterPro:Glyco_hydro_b
InterPro:Glycoside_hydrolase_SFInterPro:IPR013780PFAM:PF01055PFAM:PF13802ScanProsite:PS00129PANTHER:PTHR22762
PANTHER:PTHR22762:SF120SUPFAM:SSF51445SUPFAM:SSF74650EnsemblPlantsGene:TraesCS1D01G239100EnsemblPlants:TraesCS1D01G239100.1TIGR:cd06604
TIGR:cd14752SEG:seg::::
Description
No Description!
Coordinates
chr1D:+:328876365..328894504
Molecular Weight (calculated)
115226.0 Da
IEP (calculated)
5.774
GRAVY (calculated)
-0.266
Length
1043 amino acids
Sequence
(BLAST)
0001: MLSPCTHRIS SPLPAPHSHS RFSHQREYRG SPLAPRLPPP PPPLRCFRGT HPPAAAAGEV ATMAAPVGEM VWVPVLEEGV FRFDTSEEAR SAAGPSLSFV
0101: EPRRREEPRE GGDRPAVVPA CEVAGNVQKV VIKLPSGTSF YGTGEASGPL ERTGKRVFTW NTDAWGFGPG TTSLYQSHPW VLAVLPDGKA FGVLADTTRR
0201: CEIDLRQECT IKFSAPSAYP IITFGPYNSP AEVMMSLSHA IGTVAMPPKW SLGYHQCRWS YDSSEKVLKV VRTFREKGIP CDVIWMDIDY MDGFRCFTFD
0301: SNRFPDPKSM ADDLHSIGCK SIWMLDPGIK KEKGYFVYES GSETDVWIKK ADDSPFIGEV WPGDCVFPDF TCERTRTWWA SLVKDFVSNG VDGIWNDMNE
0401: PAVFKTTTKT MPESNIHRGD ADIGGVQNHS YYHNVYGMLM ARSTYEGMAM SNTDKRPFVL TRAGFIGSQR YAATWTGDNL SNWEHMHMSL PMVLQLGLSG
0501: QPLSGPDIGG FAGNATPKLF GRWMGVGALF PFSRGHSETG SIDHEPWSFG EECEEVCRLA LLRRYRLLPH IYTLFYLSHK KGAPVAAPLF FADSQDPELR
0601: KIETSFLLGP LLICASTSPE KGAHECAHKL PKGVWSRFDF GDSHPDLPVM YLQGGAILPV GLPIKHVGEA SLEDDLSLIV SLDENGKAEG VLFEDAGDGY
0701: GFTQENYLLT YYVAQVHSSV VSVKVLKTEG SWNRPKRNLN ISILLGGGAM ISSHGVDGEE LHITMPSGSE VSNLVATSEL ELKKRLEMIS PIPDIDEPSG
0801: QEGAELSKIP IDLKSGDWLL KVVPWIGGRI ISMTHLPTDS QWLHSRIEIN GYEEYSGTEY RSAGCTEEYK VVRRYLEHSG EEESISLEGD IGGGLVLQRH
0901: ISILKDNPKI VQINSSIQAR SVGAGSGGFS RLVCLRVHPT FTLLHPTEVV VAFTAINGSK QEFFPESGEV TLEGDLRPNG EWMLVDKCAG VSLVNTFDPS
1001: QVSKCLVHWG TGDLNMELWS EERPVSKDTP LTICHQYELR QTC
Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)
0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP
Arabidopsis Description
HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.