Factsheet for Zm00001d019497_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005453_P007	Maize	plastid	88.6	81.22
Os07t0420700-01	Rice	plasma membrane	81.74	78.64
TraesCS1D01G239100.1	Wheat	golgi, plastid	80.73	76.7
TraesCS1B01G251000.1	Wheat	plastid	80.12	76.35
TraesCS1A01G238900.1	Wheat	plastid	80.73	76.12
VIT_02s0087g00050.t01	Wine grape	cytosol	20.48	76.03
Os07t0421300-01	Rice	nucleus, plasma membrane, vacuole	74.47	75.31
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	79.82	72.77
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	64.38	64.51
VIT_02s0033g01410.t01	Wine grape	plastid	67.51	63.29
KRH62685	Soybean	nucleus	66.3	62.39
Solyc08g075530.2.1	Tomato	plastid	66.5	61.65
CDY56225	Canola	plasma membrane, plastid, vacuole	34.41	61.33
GSMUA_Achr11P...	Banana	plastid	69.42	60.56
AT3G23640.3	Thale cress	plastid	64.28	60.09
VIT_02s0087g00060.t01	Wine grape	extracellular	15.64	59.85
Bra028330.1-P	Field mustard	cytosol	53.88	59.47
CDY18102	Canola	plastid	62.87	58.33
VIT_02s0087g00030.t01	Wine grape	cytosol	27.95	55.85
CDY60313	Canola	golgi, vacuole	62.66	55.75
CDY71267	Canola	plastid	12.82	44.41
Zm00001d036608_P003	Maize	extracellular	22.91	25.8
Zm00001d048080_P002	Maize	plasma membrane	23.11	25.03
Zm00001d028227_P007	Maize	vacuole	23.01	24.86
Zm00001d039994_P001	Maize	extracellular	21.29	22.76
Zm00001d008273_P001	Maize	mitochondrion	11.81	12.93

Protein Annotations

Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A1D6HXT2	InterPro:DUF5110
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom	InterPro:Glyco_hydro_31
InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780	ProteinID:ONM53026.1
PFAM:PF01055	PFAM:PF13802	PFAM:PF17137	ScanProsite:PS00129	PANTHER:PTHR22762	PANTHER:PTHR22762:SF120
SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI0008441367	EnsemblPlantsGene:Zm00001d019497	EnsemblPlants:Zm00001d019497_P004	EnsemblPlants:Zm00001d019497_T004
SEG:seg	:	:	:	:	:

Description

heteroglycan glucosidase 1

Coordinates

chr7:+:37785330..37823197

Molecular Weight (calculated)

109667.0 Da

IEP (calculated)

6.563

GRAVY (calculated)

-0.205

Length

991 amino acids

Sequence
(BLAST)

001: MAAGTARGDM VWARVLEDGV FRFDASEAAR AAAGPSLSFA DPRRREAPRH GADTPAVVPA CQVAAGGAQK VVIKVRHATE MHACTGRWFE ILGDVWTLTC
101: FLLIKQLPPG TSFYGTGEAS GTLERTGKRV FTWNTDAWGY GPGTTSLYQS HPWVLAILPD GKALGVLADT TRRCEIDLRQ KSTIKFSAPS AYPVITFGPF
201: NAPADVMTSL SHAIGTVSMP PKWSVGYHQC RYSYDSSEKV LKVVRTFREK GIPCDVVWMD IDYMDGFRCF TFDSIRFPDP KSLVDDLHSI GCKAVWMLDP
301: GIKKEKGFFV FDSGSKNDVW VQKADGSPFV GEVWPGDCVF PDFTSEKARA WWASLVKDFI SNGVDGIWND MNEPAVSKTV TKTMPESNIH RGDADIGGVQ
401: NHSYYHNVYG MLMTRSTYKG MEMANAAKRP FVLTRAGFIG SQRYAATWTG DNLSTWEHLH MSLPMILQLG LSGQPLSGPD IGGFGGNATP KLFGRWMGLG
501: ALFPFSRGHT ETGSIDHEPW SFGEECEEVC RLALLRRYRL LPHIYTLFYH SHTKGIPVAA PVFFADPQDP ELRKVETSFL LGPLLVCAST LPNKGAHECA
601: HKLPKGIWLP FDFADSHPDL PLLYLQGGAI LPVGLPIKHV GEASLEDDLS LIIALNENGK AEGVLFEDAG DGYAFTQGDY LLTYYIAELH SSVVTVKVFK
701: SEGSWKRPKR NLKINILLGG GAMISTNGID GEEIHLTMPS ESEVSNLVAT SEFEHKKRME MIHPIPDIEE SLRQERAELS KIPVDMKSGD WFLKIVPWIG
801: GRIISMTHLP SDSQWLHSRI EIHGYEEYSG TEYRSAGCTE QYKVIRCVEQ SGEEESICME GDIGGGLVLQ RQISILKDNP KIVQIDSSIQ ARSVGAGSGG
901: FSRLVCLRVH PTFTLLHPTE VVVAFTAING SKQEISPEAG EITFEGDLRP NGEWMLVDKC VGLSLVNRFN PREDNQSLRS YTKYKCTRKF R

Best Arabidopsis Sequence Match ( AT3G23640.1 )
(BLAST)

001: MTLSGDSSET VEMTSTDMIF EPILEHGVFR FDCSVDHRKA AFPSVSFKNS KDREVPIVSH IVPAYIPTCG CLQDQQVVTF EFSPGTSFYG TGEVSGQLER
101: TGKRVFTWNT DAWGYGSGTT SLYQSHPWVL VVLPTGETLG VLADTTRKCE IDLRKEGIIR IISPASYPII TFGPFSSPTA VLESLSHAIG TVFMPPKWAL
201: GYHQCRWSYM SDKRVAEIAQ TFRDKKIPSD VIWMDIDYMD GFRCFTFDKE RFPDPSALAK DLHSNGFKAI WMLDPGIKQE EGYYVYDSGS KNDVWISRAD
301: GKPFTGEVWP GPCVFPDYTN SKARSWWANL VKEFVSNGVD GIWNDMNEPA VFKVVTKTMP ENNIHHGDDE LGGVQNHSHY HNVYGMLMAR STYEGMELAD
401: KNKRPFVLTR AGFIGSQRYA ATWTGDNLSN WEHLHMSISM VLQLGLSGQP LSGPDIGGFA GNATPRLFGR WMGVGAMFPF CRGHSEAGTD DHEPWSFGEE
501: CEEVCRAALK RRYQLLPHFY TLFYIAHTTG APVAAPIFFA DPIDSRLRAV ENGFLLGPLL IYASTLSSQG SHELQHILPR GIWHRFDFAD SHPDLPTLYL
601: QGGSIISLAP PHLHVGEFSL SDDLTLLVSL DENGKAKGLL FEDDGDGYGY TKGRFLVTHY IAERDSSTVT VKVSKTEGDW QRPNRRVHVQ LLLGGGAMLD
701: AWGMDGEFIH IKVPSESGIS ELISTSNERF KLHMENTKLI PEKEVVPGQK GMELSKEPVE LSSGDWKLNI VPWVGGRILS MTHVPSGIQW LHSRIDINGY
801: EEYSGTEYRS AGCTEEYNVI ERDLEHAGEE ESLILEGDVG GGLVLRRKIS IAKDNQRVFR IASSIEARSV GAGSGGFSRL VCLRVHPTFT LLHPTESFVS
901: FTSIDGSKHE VWPDSGDQIY EGNNLPHGKW MLVDKSLNLR MVNRFDVSQV FKCIIHWDCG TVNLELWSKE RPVSKESPLK IEHEYEVTSF P

Arabidopsis Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.