Factsheet for Zm00001d005453_P007

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG34976	Sorghum	cytosol	76.87	95.41
Zm00001d019497_P004	Maize	cytosol, nucleus, plastid	81.22	88.6
Os07t0420700-01	Rice	plasma membrane	79.93	83.88
TraesCS1D01G239100.1	Wheat	golgi, plastid	80.39	83.32
TraesCS1B01G251000.1	Wheat	plastid	79.74	82.88
TraesCS1A01G238900.1	Wheat	plastid	80.48	82.78
HORVU1Hr1G057330.1	Barley	cytosol, mitochondrion	79.19	78.75
Os07t0421300-01	Rice	nucleus, plasma membrane, vacuole	70.77	78.06
VIT_02s0087g00050.t01	Wine grape	cytosol	18.69	75.66
Bra028332.1-P	Field mustard	cytosol, nucleus, peroxisome	61.79	67.54
VIT_02s0033g01410.t01	Wine grape	plastid	65.31	66.79
CDY56225	Canola	plasma membrane, plastid, vacuole	34.32	66.73
KRH62685	Soybean	nucleus	64.11	65.81
Solyc08g075530.2.1	Tomato	plastid	64.01	64.73
GSMUA_Achr11P...	Banana	plastid	67.81	64.52
AT3G23640.3	Thale cress	plastid	62.26	63.49
Bra028330.1-P	Field mustard	cytosol	51.99	62.58
VIT_02s0087g00060.t01	Wine grape	extracellular	14.89	62.16
VIT_02s0087g00030.t01	Wine grape	cytosol	28.12	61.29
CDY18102	Canola	plastid	60.13	60.86
CDY60313	Canola	golgi, vacuole	60.04	58.26
CDY71267	Canola	plastid	12.49	47.2
Zm00001d048080_P002	Maize	plasma membrane	21.74	25.68
Zm00001d028227_P007	Maize	vacuole	21.74	25.63
Zm00001d036608_P003	Maize	extracellular	20.81	25.57
Zm00001d039994_P001	Maize	extracellular	20.35	23.73
Zm00001d008273_P001	Maize	mitochondrion	10.92	13.04

Protein Annotations

EntrezGene:103647311	Gene3D:2.60.40.1180	Gene3D:2.60.40.1760	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A1D6EMY1
InterPro:DUF5110	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Gal_mutarotase_sf_dom
InterPro:Glyco_hydro_31	InterPro:Glyco_hydro_31_AS	InterPro:Glyco_hydro_31_N_dom	InterPro:Glyco_hydro_b	InterPro:Glycoside_hydrolase_SF	InterPro:IPR013780
ProteinID:ONM21182.1	PFAM:PF01055	PFAM:PF13802	PFAM:PF17137	ScanProsite:PS00129	PANTHER:PTHR22762
PANTHER:PTHR22762:SF120	SUPFAM:SSF51445	SUPFAM:SSF74650	UniParc:UPI000843941E	EnsemblPlantsGene:Zm00001d005453	EnsemblPlants:Zm00001d005453_P007
EnsemblPlants:Zm00001d005453_T007	SEG:seg	:	:	:	:

Description

heteroglycan glucosidase 1

Coordinates

chr2:-:174636123..174667364

Molecular Weight (calculated)

118961.0 Da

IEP (calculated)

6.168

GRAVY (calculated)

-0.218

Length

1081 amino acids

Sequence
(BLAST)

0001: MGWSPRPPPI TRSTASLRLV PHFSHFRFSF HRAQESRGGG GSRRRTLRCS SAPDPLETRD DGPNGRAHCL THCLLDASNC RCCGGTAPAA AAGAAEGRMA
0101: AATAADMVWV RVLEDGVFRF DASEAARAAA GPSLSFADPR RREAPHDGAD MPAVVPVCEV AAGGSQKVVI KLPPGTSFYG TGEASGPLER TGKRVFTWNT
0201: DAWGFGPGTT SLYQSHPWVL AVLPDGKALG VLADTTRRCE IDLRQESTIK FSALSAYPVI TFGPFNTPAD VMTSLSHAIG TVSMPPKWSL GYHQCRWSYD
0301: SSEKVLKVVR TFREKDIPCD VVWMDIDYMD GFRCFTFDSI RFPDPISMVD DLHSIGCKAI WMLDPGIKKE EGYFVYDSGS KSDVWIQKAD GSPFVGEVWP
0401: GDCVFPDYTS EKTRAWWASL VKDFISIGVD GIWNDMNEPA VFKTTTKTMP ESNIHRGDAD IGGVQNHSYY HNVYGMLMAR STYKGMEMGN AAKRPFVLTR
0501: AGFIGSQRYA ATWTGDNLSN WEHLHMSLPM VLQLGLSGQP LSGPDIGGFA GNATPKLFGR WMGVGALFPF SRGHTETGSI DHEPWSFGKE CEEVCRLALL
0601: RRYRLLPHIY TLFYHSHTKG IPVATPVFFA DTQDPELRKV ETSFLLGPLL VCASTLPNKG AHEYAHKLPK GIWLSFDFAD SHPDLPVLYL QGGAILPVGL
0701: PIKHVSEASL EDDLSLIIAL NENGKAEGVL FEDAGDGYAF TQGDYLLTYY IAELHSSVVT VKILKSEGSW KRPKRNLKIN ILLGGGAMIS TDGVDGEVIH
0801: LTMPSESVVS SLVATSEFEH KKRMEMIQPI PDIEEPSGQE GAELSKIPVD LKSGDWFLKI VPWIGGRIIS MAHIPSDSQW LHSRIEINGY EEYSGAEYRS
0901: AGCTEEYKVI RRHLEQSGEE ESICMEGDIG GGLVLQRQIS ILKDNPKIVQ IDSSIQARSV GAGSGGFSRL VCLRVHPTFT LLHPTEVVVA FTAINGSKQE
1001: ISPEAGEITF EGDLKPNGEW MLVDKCVGLS LVNRFNPREV SKCFVHWGTG DVNMELWSEE RPVSNETPLR ICHQYEVQQT T

Best Arabidopsis Sequence Match ( AT3G23640.3 )
(BLAST)

0001: MERSFVTQAA VSSSSSLTSK ARASSFFFNG RSLPSLNPIS PFLFLPTSRS FALVVKSTLG RNGDKSLLRM TLSGDSSETV EMTSTDMIFE PILEHGVFRF
0101: DCSVDHRKAA FPSVSFKNSK DREVPIVSHI VPAYIPTCGC LQDQQVVTFE FSPGTSFYGT GEVSGQLERT GKRVFTWNTD AWGYGSGTTS LYQSHPWVLV
0201: VLPTGETLGV LADTTRKCEI DLRKEGIIRI ISPASYPIIT FGPFSSPTAV LESLSHAIGT VFMPPKWALG YHQCRWSYMS DKRVAEIAQT FRDKKIPSDV
0301: IWMDIDYMDG FRCFTFDKER FPDPSALAKD LHSNGFKAIW MLDPGIKQEE GYYVYDSGSK NDVWISRADG KPFTGEVWPG PCVFPDYTNS KARSWWANLV
0401: KEFVSNGVDG IWNDMNEPAV FKVVTKTMPE NNIHHGDDEL GGVQNHSHYH NVYGMLMARS TYEGMELADK NKRPFVLTRA GFIGSQRYAA TWTGDNLSNW
0501: EHLHMSISMV LQLGLSGQPL SGPDIGGFAG NATPRLFGRW MGVGAMFPFC RGHSEAGTDD HEPWSFGEEC EEVCRAALKR RYQLLPHFYT LFYIAHTTGA
0601: PVAAPIFFAD PIDSRLRAVE NGFLLGPLLI YASTLSSQGS HELQHILPRG IWHRFDFADS HPDLPTLYLQ GGSIISLAPP HLHVGEFSLS DDLTLLVSLD
0701: ENGKAKGLLF EDDGDGYGYT KGRFLVTHYI AERDSSTVTV KVSKTEGDWQ RPNRRVHVQL LLGGGAMLDA WGMDGEFIHI KVPSESGISE LISTSNERFK
0801: LHMENTKLIP EKEVVPGQKG MELSKEPVEL SSGDWKLNIV PWVGGRILSM THVPSGIQWL HSRIDINGYE EYSGTEYRSA GCTEEYNVIE RDLEHAGEEE
0901: SLILEGDVGG GLVLRRKISI AKDNQRVFRI ASSIEARSVG AGSGGFSRLV CLRVHPTFTL LHPTESFVSF TSIDGSKHEV WPDSGDQIYE GNNLPHGKWM
1001: LVDKSLNLRM VNRFDVSQVF KCIIHWDCGT VNLELWSKER PVSKESPLKI EHEYEVTSFP

Arabidopsis Description

HGL1Heteroglycan glucosidase 1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTS6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.