Factsheet for Zm00001d038446_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18376	Sorghum	mitochondrion	55.56	65.13
Os05t0473300-01	Rice	nucleus	35.84	38.31
Zm00001d043409_P001	Maize	nucleus	14.34	32.0
CDY54455	Canola	nucleus	22.58	25.51
CDY71905	Canola	nucleus	21.86	25.0
Bra005113.1-P	Field mustard	nucleus	21.86	24.7
AT2G38340.1	Thale cress	nucleus	21.51	24.59
TraesCS1B01G307000.1	Wheat	nucleus	33.33	24.16
Zm00001d038001_P001	Maize	nucleus	19.71	22.18
Zm00001d008665_P001	Maize	nucleus	20.07	21.46
HORVU1Hr1G070410.1	Barley	nucleus	29.75	21.45
CDY61527	Canola	nucleus	21.86	20.75
Zm00001d010048_P004	Maize	nucleus	21.51	16.35
Zm00001d049889_P001	Maize	nucleus	20.43	16.19
Zm00001d031861_P001	Maize	nucleus	20.43	15.88
Zm00001d048297_P001	Maize	nucleus	18.28	15.84
Zm00001d048296_P001	Maize	nucleus	17.2	15.64
Solyc10g076380.1.1	Tomato	nucleus	17.92	15.48
Zm00001d027870_P001	Maize	nucleus	17.56	15.26
KRH49463	Soybean	nucleus	18.28	14.49
Solyc10g076370.1.1	Tomato	nucleus	19.35	13.33
PGSC0003DMT400041064	Potato	nucleus	19.0	11.6
KRH00328	Soybean	nucleus	19.71	10.44
PGSC0003DMT400041065	Potato	nucleus	14.7	9.36

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	UniProt:A0A1D6M6D5	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQK86641.1
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF17
SMART:SM00380	SUPFAM:SSF54171	SignalP:SignalP-noTM	UniParc:UPI0008453715	EnsemblPlantsGene:Zm00001d038446	EnsemblPlants:Zm00001d038446_P001
EnsemblPlants:Zm00001d038446_T001	SEG:seg	:	:	:	:

Description

Dehydration-responsive element-binding protein 2E

Coordinates

chr6:+:157407857..157411040

Molecular Weight (calculated)

30713.2 Da

IEP (calculated)

7.293

GRAVY (calculated)

-0.399

Length

279 amino acids

Sequence
(BLAST)

001: MEVPRKAMAS SLVVWLLLVH SCRLQVPCAL GADDCWVLDR DRYRFCFRTA KCRAACAEDR FVDGRCKHGF PYLLPLCECL RPQCAAPGPS SHSELGYAAG
101: RQQALASRSA TAKPFAERSR PAQRGMGGPD NTRHNYRGVR QRRWGKWVAE IREPNRGKRH WLGTFDNPVD AAVAYDRAAV SIHGAHAHLN FPCSAATTAD
201: ASLEHEAKPM VAAAALGGGG AEAVSQRQED DDPHDIAMYI DFDAVFDMVP FCHGIKREDC QHEGFDGDAV HSPLWALGD

Best Arabidopsis Sequence Match ( AT1G75490.1 )
(BLAST)

001: MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL

Arabidopsis Description

DREB2DDehydration-responsive element-binding protein 2D [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.