Factsheet for HORVU1Hr1G070410.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G307000.1	Wheat	nucleus	58.91	59.22
Os05t0473300-01	Rice	nucleus	27.39	40.61
EES18376	Sorghum	mitochondrion	22.74	36.97
Zm00001d038446_P001	Maize	vacuole	21.45	29.75
HORVU2Hr1G111510.1	Barley	nucleus	13.7	27.46
CDY54455	Canola	nucleus	16.28	25.51
CDY71905	Canola	nucleus	16.02	25.41
Bra005113.1-P	Field mustard	nucleus	16.02	25.1
AT2G38340.1	Thale cress	nucleus	15.5	24.59
HORVU1Hr1G063100.1	Barley	nucleus	14.73	22.98
CDY61527	Canola	nucleus	15.76	20.75
HORVU6Hr1G050520.2	Barley	nucleus	12.66	20.68
HORVU6Hr1G050500.2	Barley	nucleus	14.47	18.67
HORVU1Hr1G060060.1	Barley	nucleus, plastid	14.47	18.24
Solyc10g076380.1.1	Tomato	nucleus	13.7	16.41
KRH49463	Soybean	nucleus	14.47	15.91
HORVU1Hr1G060490.5	Barley	plasma membrane	17.57	15.04
Solyc10g076370.1.1	Tomato	nucleus	15.25	14.57
PGSC0003DMT400041064	Potato	nucleus	15.5	13.13
PGSC0003DMT400041065	Potato	nucleus	12.4	10.96
KRH00328	Soybean	nucleus	14.47	10.63

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	UniProt:A0A287G4C7	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G070410	EnsemblPlants:HORVU1Hr1G070410.1
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241
PANTHER:PTHR31241:SF17	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000B47383B	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:-:489317903..489320510

Molecular Weight (calculated)

41984.9 Da

IEP (calculated)

8.787

GRAVY (calculated)

-0.403

Length

387 amino acids

Sequence
(BLAST)

001: QLRHHITLLD GGTGARRNRR GSLGAGRGAL PDEVPRRSVV PRGGRQHTPS GSARESLPPR VAGEGRRRRM PMERAVGVEG EGMEQATATA TATPPSSTSK
101: TKRVRPKSSA ILGVRTPVTA PPGWKGGPEN RHHKYRGVRQ RMWGRWVSEF REPNGGKRHW LGSFDTAAEA ALAYDRAAMA IFGSRAIVNF PSAISIPTAQ
201: PVECHPMSSS PSAAAASVFV KHKLKPVAAA ASVLAEHGVK PMMAATSVLD EHEVKPMFIA PVFGEHEVKP MITASVFGER EVKPMVAAFS ECEVKPIVTS
301: SVFGEHEVKP TTVHGGDDGM GITQHWDASW AEREEAYVDY LKDIAMYIDV DPITEKLAYH PDICSEYSQV GGFDAEFTIS PLWELGD

Best Arabidopsis Sequence Match ( AT2G40340.2 )
(BLAST)

001: MKGKGGPENG ICDYRGVRQR RWGKWVAEIR EPDGGARLWL GTFSSSYEAA LAYDEAAKAI YGQSARLNLP EITNRSSSTA ATATVSGSVT AFSDESEVCA
101: REDTNASSGF GQVKLEDCSD EYVLLDSSQC IKEELKGKEE VREEHNLAVG FGIGQDSKRE TLDAWLMGNG NEQEPLEFGV DETFDINELL GILNDNNVSG
201: QETMQYQVDR HPNFSYQTQF PNSNLLGSLN PMEIAQPGVD YGCPYVQPSD MENYGIDLDH RRFNDLDIQD LDFGGDKDVH GST

Arabidopsis Description

DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.