CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00328	Soybean	nucleus	86.93	58.06
KRH22495	Soybean	nucleus	24.15	42.93
KRH26854	Soybean	nucleus	23.86	42.64
KRH56072	Soybean	nucleus	23.58	38.78
KRH25441	Soybean	nucleus	22.73	37.91
AT2G38340.1	Thale cress	nucleus	23.86	34.43
CDY71905	Canola	nucleus	23.58	34.02
Bra005113.1-P	Field mustard	nucleus	23.3	33.2
CDY54455	Canola	nucleus	22.73	32.39
KRH51773	Soybean	nucleus	19.89	28.11
KRH61095	Soybean	nucleus	19.32	27.76
CDY61527	Canola	nucleus	23.01	27.55
KRH05892	Soybean	nucleus	20.74	25.44
KRH73245	Soybean	nucleus	27.27	24.49
KRH66977	Soybean	nucleus	19.6	24.3
KRH14906	Soybean	nucleus	26.99	24.17
KRH15125	Soybean	nucleus	19.32	24.03
EES18376	Sorghum	mitochondrion	16.19	23.95
KRG93713	Soybean	nucleus	18.47	23.81
KRG95297	Soybean	nucleus	19.03	23.76
KRH71963	Soybean	nucleus	19.03	21.68
KRG93709	Soybean	nucleus	14.77	21.67
KRH16554	Soybean	nucleus	15.91	21.62
Solyc10g076370.1.1	Tomato	nucleus	24.72	21.48
KRH33104	Soybean	nucleus	19.03	21.0
Solyc10g076380.1.1	Tomato	nucleus	18.18	19.81
Os05t0473300-01	Rice	nucleus	14.49	19.54
PGSC0003DMT400041064	Potato	nucleus	25.0	19.26
KRH14926	Soybean	nucleus	17.33	18.89
Zm00001d038446_P001	Maize	vacuole	14.49	18.28
KRH73281	Soybean	nucleus, plastid	17.33	18.05
PGSC0003DMT400041065	Potato	nucleus	20.45	16.44
TraesCS1B01G307000.1	Wheat	nucleus	17.33	15.84
HORVU1Hr1G070410.1	Barley	nucleus	15.91	14.47

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	EMBL:ACUP02004364	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
EnsemblPlantsGene:GLYMA_07G156200	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	UniProt:K7L1Z0	EnsemblPlants:KRH49463	ProteinID:KRH49463	ProteinID:KRH49463.1	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF2	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0002338974	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:19200009..19202353

Molecular Weight (calculated)

38837.1 Da

IEP (calculated)

5.764

GRAVY (calculated)

-0.898

Length

352 amino acids

Sequence
(BLAST)

001: MKTNNNVSGE RKSRKRRSGE SDSVEDTLEK WKEYNRQQQL GSRENGVEVI HKVPAKGSRK GCMRGKGGPQ NSDCKFRGVR QRIWGKWVAE IREPINGKLV
101: GEKANRLWLG TFSTALEAAL AYDEAAKAMY GPCARLNFPE PIDSNGSSSS SGSDKKSPSG SSENGGDVAI AEELEVNHRR CHEDRPRFSK VGVFEKAEEM
201: PVLSVGCVAD DSIEELKEIS NGFEQCQTSE ECKATSLNDV KSEVPRENEG IEKELEEVLK NSGIGGEGRH LQKEPMDIPM NTRSNFCSSS ASSDAATILI
301: KSEETRGESV ETLNSYELSC SNHCLGYMHN NMLPDTNPRP NSETSIAKKH TE

Best Arabidopsis Sequence Match ( AT2G40340.6 )
(BLAST)

001: MKTSSCSYFG VITFRKRKSR GTRDVAEILR QWREYNEQIE AESCIDGGGP KSIRKPPPKG SRKGCMKGKG GPENGICDYR GVRQRRWGKW VAEIREPDGG
101: ARLWLGTFSS SYEAALAYDE AAKAIYGQSA RLNLPEITNR SSSTAATATV SGSVTAFSDE SEVCAREDTN ASSGFGQVKL EDCSDEYVLL DSSQCIKEEL
201: KGKEEVREEH NLAVGFGIGQ DSKRETLDAW LMGNGNEQEP LEFGVDETFD INELLGILND NNVSGQETMQ YQVDRHPNFS YQTQFPNSNL LGSLNPMEIA
301: QPGVDYGCPY VQPSDMENYG IDLDHRRFND LDIQDLDFGG DKDVHGST

Arabidopsis Description

DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [mitochondrion,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.