Factsheet for Os05t0473300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18376	Sorghum	mitochondrion	37.93	41.6
Zm00001d038446_P001	Maize	vacuole	38.31	35.84
TraesCS1B01G307000.1	Wheat	nucleus	41.76	28.31
HORVU1Hr1G070410.1	Barley	nucleus	40.61	27.39
Os08t0565200-01	Rice	nucleus	20.69	23.48
CDY54455	Canola	nucleus	20.69	21.86
AT2G38340.1	Thale cress	nucleus	20.31	21.72
CDY71905	Canola	nucleus	20.31	21.72
Bra005113.1-P	Field mustard	nucleus	20.31	21.46
Os05t0351200-00	Rice	nucleus	21.84	21.19
Os01t0165000-02	Rice	nucleus	21.84	20.8
CDY61527	Canola	nucleus	20.31	18.03
Os03t0174400-00	Rice	nucleus	20.69	16.98
Solyc10g076380.1.1	Tomato	nucleus	19.16	15.48
KRH49463	Soybean	nucleus	19.54	14.49
Solyc10g076370.1.1	Tomato	nucleus	19.54	12.59
PGSC0003DMT400041064	Potato	nucleus	20.31	11.6
KRH00328	Soybean	nucleus	20.31	10.06
PGSC0003DMT400041065	Potato	nucleus	15.33	9.13

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.1	EntrezGene:4339084	ProteinID:AAU44236.1	EMBL:AK102559	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAF17734.2	ProteinID:BAS94507.1	InterPro:DNA-bd_dom_sf	ProteinID:EEE64063.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	GO:GO:0045893
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os05g0473300	EnsemblPlants:Os05t0473300-01	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF17	UniProt:Q65WX1	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000043F4C6	RefSeq:XP_015638470.1	RefSeq:XP_015638471.1	SEG:seg	:	:

Description

ETHYLENE RESPONSE FACTOR 43Hypothetical conserved gene. (Os05t0473300-01);Hypothetical conserved gene. (Os05t0473300-02)

Coordinates

chr5:+:23247706..23250054

Molecular Weight (calculated)

27690.5 Da

IEP (calculated)

4.803

GRAVY (calculated)

-0.411

Length

261 amino acids

Sequence
(BLAST)

001: MAAGEGDVGM EVETKAPAMP PPPPASSSAA RKKKQARAKN GDTPEPDAAG GARARASRRA KRGPGSYRGV RQRRWGKWVS EIREPNRGKR HWLGTFGSAV
101: DAALAYDKAA ASILGPRAVL NFPAFSPPAA AIAAPEQCEP PFCSPATTAA ATAPEQRQTP GCSPAAVAGS GGGAVFEERD VKPVVLPLPL PAILQDGGGT
201: EAMAQHWDWE WDASWPELEM FECLDDIAMY LDVDAVMTTR DCKVEELDAD IVDSPLWTLS D

Best Arabidopsis Sequence Match ( AT2G40340.2 )
(BLAST)

001: MKGKGGPENG ICDYRGVRQR RWGKWVAEIR EPDGGARLWL GTFSSSYEAA LAYDEAAKAI YGQSARLNLP EITNRSSSTA ATATVSGSVT AFSDESEVCA
101: REDTNASSGF GQVKLEDCSD EYVLLDSSQC IKEELKGKEE VREEHNLAVG FGIGQDSKRE TLDAWLMGNG NEQEPLEFGV DETFDINELL GILNDNNVSG
201: QETMQYQVDR HPNFSYQTQF PNSNLLGSLN PMEIAQPGVD YGCPYVQPSD MENYGIDLDH RRFNDLDIQD LDFGGDKDVH GST

Arabidopsis Description

DREB2CIntegrase-type DNA-binding superfamily protein [Source:TAIR;Acc:AT2G40340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.