Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71905 | Canola | nucleus | 67.21 | 67.21 |
| Bra005113.1-P | Field mustard | nucleus | 67.21 | 66.4 |
| CDY54455 | Canola | nucleus | 67.21 | 66.4 |
| CDY61527 | Canola | nucleus | 66.8 | 55.44 |
| AT2G40350.2 | Thale cress | nucleus | 24.18 | 35.98 |
| AT1G75490.1 | Thale cress | nucleus | 25.82 | 30.58 |
| EES18376 | Sorghum | mitochondrion | 24.59 | 25.21 |
| AT5G05410.1 | Thale cress | nucleus | 33.2 | 24.18 |
| KRH49463 | Soybean | nucleus | 34.43 | 23.86 |
| AT3G11020.1 | Thale cress | nucleus | 30.33 | 22.42 |
| AT3G57600.1 | Thale cress | nucleus | 25.0 | 22.02 |
| AT5G18450.1 | Thale cress | nucleus | 27.46 | 21.82 |
| Zm00001d038446_P001 | Maize | vacuole | 24.59 | 21.51 |
| Os05t0473300-01 | Rice | nucleus | 21.72 | 20.31 |
| AT2G40340.6 | Thale cress | mitochondrion, nucleus, plastid | 28.28 | 19.83 |
| Solyc10g076380.1.1 | Tomato | nucleus | 26.23 | 19.81 |
| Solyc10g076370.1.1 | Tomato | nucleus | 32.79 | 19.75 |
| PGSC0003DMT400041064 | Potato | nucleus | 33.2 | 17.72 |
| AT2G40220.1 | Thale cress | nucleus | 21.72 | 16.16 |
| KRH00328 | Soybean | nucleus | 34.02 | 15.75 |
| TraesCS1B01G307000.1 | Wheat | nucleus | 24.59 | 15.58 |
| HORVU1Hr1G070410.1 | Barley | nucleus | 24.59 | 15.5 |
| PGSC0003DMT400041065 | Potato | nucleus | 25.41 | 14.16 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | EntrezGene:818414 | ProteinID:AAC28770.1 | ProteinID:AEC09525.1 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | ArrayExpress:AT2G38340 | EnsemblPlantsGene:AT2G38340 | RefSeq:AT2G38340 | TAIR:AT2G38340 | RefSeq:AT2G38340-TAIR-G |
| EnsemblPlants:AT2G38340.1 | TAIR:AT2G38340.1 | EMBL:AY072421 | EMBL:BT006276 | InterPro:DNA-bd_dom_sf | Symbol:DREB19 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 |
| GO:GO:0034605 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | InterPro:IPR001471 | InterPro:IPR036955 |
| RefSeq:NP_001318372.1 | UniProt:O80917 | PFAM:PF00847 | PO:PO:0000293 | PO:PO:0005352 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009066 |
| PO:PO:0009073 | PO:PO:0020030 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31241 | PANTHER:PTHR31241:SF2 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00000A3AE9 | SEG:seg |
Description
DREB2EDehydration-responsive element-binding protein 2E [Source:UniProtKB/Swiss-Prot;Acc:O80917]
Coordinates
chr2:-:16067396..16068615
Molecular Weight (calculated)
27371.7 Da
IEP (calculated)
8.580
GRAVY (calculated)
-0.923
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEDNGSKQ SSSASVVSSR RRRRVVEPVE ATLQRWEEEG LARARRVQAK GSKKGCMRGK GGPENPVCRF RGVRQRVWGK WVAEIREPVS HRGANSSRSK
101: RLWLGTFATA AEAALAYDRA ASVMYGPYAR LNFPEDLGGG RKKDEEAESS GGYWLETNKA GNGVIETEGG KDYVVYNEDA IELGHDKTQN PMTDNEIVNP
201: AVKSEEGYSY DRFKLDNGLL YNEPQSSSYH QGGGFDSYFE YFRF
101: RLWLGTFATA AEAALAYDRA ASVMYGPYAR LNFPEDLGGG RKKDEEAESS GGYWLETNKA GNGVIETEGG KDYVVYNEDA IELGHDKTQN PMTDNEIVNP
201: AVKSEEGYSY DRFKLDNGLL YNEPQSSSYH QGGGFDSYFE YFRF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.