Factsheet for Os05t0351200-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21759	Sorghum	nucleus	58.74	61.48
Zm00001d038001_P001	Maize	nucleus	55.76	60.48
TraesCS1D01G225000.1	Wheat	plastid	57.25	59.92
TraesCS1B01G236700.1	Wheat	nucleus	56.13	58.98
TraesCS1A01G223400.1	Wheat	nucleus	56.13	58.08
HORVU1Hr1G060060.1	Barley	nucleus, plastid	55.02	48.21
GSMUA_Achr9P18060_001	Banana	nucleus	36.06	37.74
GSMUA_Achr5P07400_001	Banana	nucleus	40.89	37.67
GSMUA_Achr3P10100_001	Banana	nucleus	37.92	36.17
VIT_13s0067g01400.t01	Wine grape	nucleus	38.29	33.66
PGSC0003DMT400085168	Potato	nucleus	33.83	31.38
CDY52427	Canola	nucleus	36.8	30.65
Bra004978.1-P	Field mustard	nucleus	35.32	29.97
AT2G40220.1	Thale cress	nucleus	36.43	29.88
KRH73281	Soybean	nucleus, plastid	37.17	29.59
CDY54991	Canola	nucleus	36.8	29.38
PGSC0003DMT400092312	Potato	nucleus	33.83	28.98
CDY07614	Canola	nucleus	36.06	28.87
Bra000178.1-P	Field mustard	nucleus	36.06	28.87
KRH14926	Soybean	nucleus	33.46	27.86
Os08t0565200-01	Rice	nucleus	22.3	26.09
Os03t0174400-00	Rice	nucleus	26.39	22.33
Os05t0473300-01	Rice	nucleus	21.19	21.84
Os01t0165000-02	Rice	nucleus	21.56	21.17

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	ProteinID:AAV44075.1	InterPro:ABI4	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:BAH93104.1	ProteinID:BAS93538.1	UniProt:C7J2Z1	InterPro:DNA-bd_dom_sf	GO:GO:0000003	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009738	GO:GO:0009791	GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	GO:GO:0045893
GO:GO:0048316	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os05g0351200	EnsemblPlants:Os05t0351200-00	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31241	PANTHER:PTHR31241:SF7	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0001B66783	SEG:seg	:	:	:	:

Description

ETHYLENE RESPONSE FACTOR 117Similar to AP2 domain transcription factor. (Os05t0351200-00)

Coordinates

chr5:-:16600698..16601813

Molecular Weight (calculated)

27628.1 Da

IEP (calculated)

7.857

GRAVY (calculated)

-0.339

Length

269 amino acids

Sequence
(BLAST)

001: MEPSDDACTV AAPAAETAAS SSGAGGGGGG GRTKKKAAGK GGPENGKFRY RGVRQRSWGK WVAEIREPRK RSRKWLGTFA TAEDAARAYD RAALLLYGPR
101: AHLNLTAPPP LPPPPPSSAA AAAASSSSAA SSTSAPPLRP LLPRPPHLHP AFHHQPFHHH LLQPQPPPPP PPLYYAATAS TSTVTTTTTA PPPQLAAAAP
201: AAVLVAAAVS STAETQAVVA TAPEDAASAA AAAAAEEEAA WGFHGGDEED YAAALLWSEP DPWFDLFLK

Best Arabidopsis Sequence Match ( AT2G40220.1 )
(BLAST)

001: MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY

Arabidopsis Description

ABI4Ethylene-responsive transcription factor ABI4 [Source:UniProtKB/Swiss-Prot;Acc:A0MES8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.