Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000178.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY52427 | Canola | nucleus | 89.88 | 93.5 |
| CDY54991 | Canola | nucleus | 78.27 | 78.04 |
| AT2G40220.1 | Thale cress | nucleus | 73.81 | 75.61 |
| CDY33815 | Canola | nucleus | 16.67 | 48.7 |
| VIT_13s0067g01400.t01 | Wine grape | nucleus | 40.48 | 44.44 |
| GSMUA_Achr5P07400_001 | Banana | nucleus | 34.23 | 39.38 |
| GSMUA_Achr9P18060_001 | Banana | nucleus | 30.06 | 39.3 |
| KRH14926 | Soybean | nucleus | 36.9 | 38.39 |
| KRH73281 | Soybean | nucleus, plastid | 38.39 | 38.17 |
| Zm00001d038001_P001 | Maize | nucleus | 27.98 | 37.9 |
| GSMUA_Achr3P10100_001 | Banana | nucleus | 31.25 | 37.23 |
| TraesCS1D01G225000.1 | Wheat | plastid | 28.27 | 36.97 |
| PGSC0003DMT400085168 | Potato | nucleus | 31.85 | 36.9 |
| TraesCS1B01G236700.1 | Wheat | nucleus | 27.98 | 36.72 |
| KXG21759 | Sorghum | nucleus | 27.98 | 36.58 |
| TraesCS1A01G223400.1 | Wheat | nucleus | 28.27 | 36.54 |
| Os05t0351200-00 | Rice | nucleus | 28.87 | 36.06 |
| PGSC0003DMT400092312 | Potato | nucleus | 31.85 | 34.08 |
| HORVU1Hr1G060060.1 | Barley | nucleus, plastid | 27.98 | 30.62 |
| CDY39036 | Canola | nucleus | 17.86 | 30.3 |
| CDY20377 | Canola | nucleus | 17.56 | 29.8 |
| CDY70626 | Canola | nucleus | 17.26 | 28.43 |
| CDY47519 | Canola | nucleus | 17.26 | 28.16 |
| CDX68128 | Canola | nucleus | 16.96 | 27.94 |
| CDY64211 | Canola | nucleus, plastid | 16.96 | 27.67 |
| CDX88955 | Canola | nucleus | 18.75 | 24.23 |
| CDY06088 | Canola | nucleus | 19.35 | 24.07 |
| CDY52095 | Canola | nucleus | 19.05 | 24.06 |
| CDX72012 | Canola | nucleus | 19.35 | 23.81 |
| CDY71905 | Canola | nucleus | 17.26 | 23.77 |
| CDY54455 | Canola | nucleus | 17.26 | 23.48 |
| CDX70820 | Canola | nucleus | 18.75 | 22.5 |
| CDY58117 | Canola | nucleus | 19.05 | 22.15 |
| CDY02629 | Canola | nucleus | 18.75 | 21.88 |
| CDX93190 | Canola | nucleus | 13.69 | 21.6 |
| CDX92610 | Canola | nucleus | 19.35 | 21.24 |
| CDY25420 | Canola | nucleus | 19.64 | 20.12 |
| CDY67039 | Canola | nucleus | 16.96 | 19.52 |
| CDY61527 | Canola | nucleus | 16.96 | 19.39 |
| CDY36289 | Canola | nucleus | 16.67 | 19.24 |
| CDY00987 | Canola | nucleus | 16.96 | 18.33 |
| CDY08557 | Canola | nucleus | 16.67 | 17.83 |
| CDY04950 | Canola | nucleus | 16.96 | 17.59 |
| CDY52149 | Canola | nucleus | 16.67 | 17.07 |
| CDX98843 | Canola | nucleus | 16.67 | 16.77 |
| CDX73896 | Canola | nucleus | 19.05 | 16.75 |
| CDX70151 | Canola | nucleus | 16.37 | 16.67 |
| CDY52924 | Canola | nucleus | 14.58 | 14.58 |
| CDY00719 | Canola | nucleus | 3.27 | 4.64 |
| CDY33814 | Canola | nucleus | 0.6 | 2.3 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078F3N1 | UniProt:A0A078F3N1 | InterPro:ABI4 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY07614 | ProteinID:CDY07614 | ProteinID:CDY07614.1 | InterPro:DNA-bd_dom_sf | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0048316 | EnsemblPlantsGene:GSBRNA2T00124712001 |
| InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 |
| PANTHER:PTHR31241:SF7 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00025402C9 | SEG:seg | : |
Description
BnaA03g18970DBnaA03g18970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3N1]
Coordinates
chrLK031980:+:94939..97834
Molecular Weight (calculated)
36646.8 Da
IEP (calculated)
5.776
GRAVY (calculated)
-0.828
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPLPSQQQQ QQQHNLDDSI QQTLTHNPQT DSTDSTSSGQ QRKRKGKGGP DNSKFRYRGV RQRSWGKWVA EIREPRKRTR KWLGTFATAE DAARAYDRAA
101: VFLYGSRAQL NLSPSSPSSV SSSSSTVSAA SSSPSSSSSS TQTLRPLLPR PSASSSASAF GHYGVPFTNN IFLSGGTSML CPSYGLLPHQ QQQQQHNQMT
201: QVGQFHHQPY QNLHSFNNNN KMGDVELTDV PVANSTSFRH EVALGQEQGG SACNNTNYLM ENMNSLTGSV GSSLSISTAV VDPVSSMGMD PGYNMVGDGS
301: ATGWPFGGED EYSHWGMEEE AYEEVEEEET KDETAI
101: VFLYGSRAQL NLSPSSPSSV SSSSSTVSAA SSSPSSSSSS TQTLRPLLPR PSASSSASAF GHYGVPFTNN IFLSGGTSML CPSYGLLPHQ QQQQQHNQMT
201: QVGQFHHQPY QNLHSFNNNN KMGDVELTDV PVANSTSFRH EVALGQEQGG SACNNTNYLM ENMNSLTGSV GSSLSISTAV VDPVSSMGMD PGYNMVGDGS
301: ATGWPFGGED EYSHWGMEEE AYEEVEEEET KDETAI
001: MDPLASQHQH NHLEDNNQTL THNNPQSDST TDSSTSSAQR KRKGKGGPDN SKFRYRGVRQ RSWGKWVAEI REPRKRTRKW LGTFATAEDA ARAYDRAAVY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY
101: LYGSRAQLNL TPSSPSSVSS SSSSVSAASS PSTSSSSTQT LRPLLPRPAA ATVGGGANFG PYGIPFNNNI FLNGGTSMLC PSYGFFPQQQ QQQNQMVQMG
201: QFQHQQYQNL HSNTNNNKIS DIELTDVPVT NSTSFHHEVA LGQEQGGSGC NNNSSMEDLN SLAGSVGSSL SITHPPPLVD PVCSMGLDPG YMVGDGSSTI
301: WPFGGEEEYS HNWGSIWDFI DPILGEFY
Arabidopsis Description
ABI4Ethylene-responsive transcription factor ABI4 [Source:UniProtKB/Swiss-Prot;Acc:A0MES8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.