Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023674.1-P | Field mustard | nucleus | 93.08 | 93.4 |
| CDY02629 | Canola | nucleus | 91.35 | 91.67 |
| CDX70820 | Canola | nucleus | 76.47 | 78.93 |
| CDX92610 | Canola | nucleus | 80.28 | 75.82 |
| AT5G18450.1 | Thale cress | nucleus | 79.58 | 74.92 |
| CDY25420 | Canola | nucleus | 80.28 | 70.73 |
| CDY33815 | Canola | nucleus | 20.07 | 50.43 |
| PGSC0003DMT400073853 | Potato | nucleus | 25.61 | 45.96 |
| Solyc04g050750.1.1 | Tomato | nucleus | 25.26 | 45.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.61 | 36.63 |
| CDY39036 | Canola | nucleus | 24.57 | 35.86 |
| CDX68128 | Canola | nucleus | 24.91 | 35.29 |
| CDY47519 | Canola | nucleus | 24.91 | 34.95 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 23.53 | 34.87 |
| CDY20377 | Canola | nucleus | 23.88 | 34.85 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 23.18 | 34.72 |
| CDY70626 | Canola | nucleus | 24.22 | 34.31 |
| CDY64211 | Canola | nucleus, plastid | 23.88 | 33.5 |
| Os08t0565200-01 | Rice | nucleus | 26.3 | 33.04 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 26.3 | 33.04 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 26.3 | 32.76 |
| TraesCS2B01G529200.1 | Wheat | plastid | 21.8 | 32.64 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 25.95 | 32.47 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 26.64 | 31.05 |
| CDX93190 | Canola | nucleus | 22.15 | 30.05 |
| CDY71905 | Canola | nucleus | 24.22 | 28.69 |
| CDY54455 | Canola | nucleus | 23.53 | 27.53 |
| CDX88955 | Canola | nucleus | 24.22 | 26.92 |
| CDY06088 | Canola | nucleus | 24.91 | 26.67 |
| CDX72012 | Canola | nucleus | 24.91 | 26.37 |
| CDY52095 | Canola | nucleus | 23.53 | 25.56 |
| CDY36289 | Canola | nucleus | 24.22 | 24.05 |
| CDY67039 | Canola | nucleus | 24.22 | 23.97 |
| CDY61527 | Canola | nucleus | 23.53 | 23.13 |
| CDY08557 | Canola | nucleus | 24.91 | 22.93 |
| CDY00987 | Canola | nucleus | 24.57 | 22.83 |
| CDY52149 | Canola | nucleus | 24.57 | 21.65 |
| CDY04950 | Canola | nucleus | 24.22 | 21.6 |
| CDX70151 | Canola | nucleus | 24.57 | 21.52 |
| Zm00001d049889_P001 | Maize | nucleus | 25.95 | 21.31 |
| CDX98843 | Canola | nucleus | 24.57 | 21.26 |
| Zm00001d031861_P001 | Maize | nucleus | 25.95 | 20.89 |
| CDY52924 | Canola | nucleus | 23.88 | 20.54 |
| EER92302 | Sorghum | nucleus | 24.91 | 20.51 |
| CDY52427 | Canola | nucleus | 22.49 | 20.12 |
| OQU80673 | Sorghum | nucleus | 26.3 | 19.59 |
| CDX73896 | Canola | nucleus | 25.26 | 19.11 |
| CDY07614 | Canola | nucleus | 22.15 | 19.05 |
| CDY54991 | Canola | nucleus | 22.15 | 18.99 |
| CDY33814 | Canola | nucleus | 2.42 | 8.05 |
| CDY00719 | Canola | nucleus | 5.88 | 7.17 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078J5E5 | UniProt:A0A078J5E5 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDY58117 | ProteinID:CDY58117 | ProteinID:CDY58117.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00023137001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF17 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EDFD39 | SEG:seg | : | : | : | : |
Description
BnaA02g35180DBnaA02g35180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5E5]
Coordinates
chrLK033635:+:49652..50521
Molecular Weight (calculated)
32435.7 Da
IEP (calculated)
5.271
GRAVY (calculated)
-0.783
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEQQPPAK KRNMGRSRKG CMKGKGGPEN ATCTFRGVRQ RTWGKWVAEI REPNHGTRLW LGTFNTSVEA AMAYDEAAKK LYGHEAKLNL LHTQQQQKEK
101: VNRNLSFSDH ESGSWDYKLD KVRGLDLGLV PSSGSRGSWS GSFSFIQEDD KTTSESSVFW LLPKRSDSQD QESVNAASSL TFSTKLKPMT PDYGLSNGVG
201: SRFLVEQENR TVYDVSLSCG SSDNNESILV PSVGGGEGMH KTEVEEGKGY LEMDDLLEID DLGLLIGRNG DFKNWCCDEF QHPWNWFLE
101: VNRNLSFSDH ESGSWDYKLD KVRGLDLGLV PSSGSRGSWS GSFSFIQEDD KTTSESSVFW LLPKRSDSQD QESVNAASSL TFSTKLKPMT PDYGLSNGVG
201: SRFLVEQENR TVYDVSLSCG SSDNNESILV PSVGGGEGMH KTEVEEGKGY LEMDDLLEID DLGLLIGRNG DFKNWCCDEF QHPWNWFLE
001: MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
Arabidopsis Description
DREB2GDehydration-responsive element-binding protein 2G [Source:UniProtKB/Swiss-Prot;Acc:P61827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.