Factsheet for Solyc04g050750.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073853	Potato	nucleus	80.12	80.12
Solyc10g080310.1.1	Tomato	nucleus	28.57	63.01
GSMUA_Achr3P00320_001	Banana	nucleus	39.13	32.31
GSMUA_AchrUn_...	Banana	nucleus	39.13	31.19
TraesCS2B01G529200.1	Wheat	plastid	37.27	31.09
HORVU2Hr1G111510.1	Barley	nucleus	36.65	30.57
Os08t0565200-01	Rice	nucleus	38.51	26.96
TraesCS1B01G256000.1	Wheat	nucleus	37.27	26.09
TraesCS1A01G244800.1	Wheat	nucleus	37.27	25.86
Solyc04g080910.1.1	Tomato	nucleus	39.75	25.81
Bra023674.1-P	Field mustard	nucleus	45.96	25.69
TraesCS1D01G244500.1	Wheat	nucleus	36.65	25.54
CDX70820	Canola	nucleus	44.1	25.36
CDY02629	Canola	nucleus	45.34	25.35
CDY58117	Canola	nucleus	45.34	25.26
Bra006460.1-P	Field mustard	nucleus	44.1	24.4
HORVU1Hr1G063100.1	Barley	nucleus	37.27	24.19
CDX92610	Canola	nucleus	44.1	23.2
Bra002159.1-P	Field mustard	nucleus	44.1	23.2
AT5G18450.1	Thale cress	nucleus	44.1	23.13
CDY25420	Canola	nucleus	43.48	21.34
Solyc06g050520.1.1	Tomato	nucleus	37.89	20.33
Solyc10g076380.1.1	Tomato	nucleus	35.4	17.65
Zm00001d049889_P001	Maize	nucleus	37.89	17.33
Zm00001d031861_P001	Maize	nucleus	38.51	17.27
EER92302	Sorghum	nucleus	35.4	16.24
OQU80673	Sorghum	nucleus	39.13	16.24
Solyc05g052410.1.1	Tomato	nucleus	37.89	15.29
Solyc10g076370.1.1	Tomato	nucleus	36.65	14.57

Protein Annotations

MapMan:15.5.7.2	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	GO:GO:0045893
InterPro:IPR001471	InterPro:IPR036955	UniProt:K4BS39	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31241	PANTHER:PTHR31241:SF18	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:Solyc04g050750.1	EnsemblPlants:Solyc04g050750.1.1
UniParc:UPI0002766DBC	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:-:48189917..48190402

Molecular Weight (calculated)

17949.9 Da

IEP (calculated)

5.384

GRAVY (calculated)

-0.732

Length

161 amino acids

Sequence
(BLAST)

001: MEECGKSRIE SVESKRKSRS RKGCMRGKGG PENASCTYRG VRQRTWGKWV AEIREPNGGA RIWLGTFNTS VEAARAYDDA ARRLYGSDAK LNLSEQESTD
101: VGIIEDGDGE CSVLEEASIF KDGNGKYLVW DTPAPSLLGV DFHGDATTCF NWKNQTEMMY F

Best Arabidopsis Sequence Match ( AT5G18450.1 )
(BLAST)

001: MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF

Arabidopsis Description

DREB2GDehydration-responsive element-binding protein 2G [Source:UniProtKB/Swiss-Prot;Acc:P61827]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.