Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023674.1-P | Field mustard | nucleus | 92.01 | 92.01 |
| CDY58117 | Canola | nucleus | 91.67 | 91.35 |
| CDX70820 | Canola | nucleus | 76.39 | 78.57 |
| CDX92610 | Canola | nucleus | 79.17 | 74.51 |
| AT5G18450.1 | Thale cress | nucleus | 79.17 | 74.27 |
| CDY25420 | Canola | nucleus | 78.47 | 68.9 |
| CDY33815 | Canola | nucleus | 19.79 | 49.57 |
| PGSC0003DMT400073853 | Potato | nucleus | 25.69 | 45.96 |
| Solyc04g050750.1.1 | Tomato | nucleus | 25.35 | 45.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.69 | 36.63 |
| CDY39036 | Canola | nucleus | 24.31 | 35.35 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 23.61 | 35.23 |
| CDX68128 | Canola | nucleus | 24.65 | 34.8 |
| CDY47519 | Canola | nucleus | 24.65 | 34.47 |
| CDY20377 | Canola | nucleus | 23.61 | 34.34 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 22.92 | 33.85 |
| CDY70626 | Canola | nucleus | 23.96 | 33.82 |
| CDY64211 | Canola | nucleus, plastid | 23.96 | 33.5 |
| TraesCS2B01G529200.1 | Wheat | plastid | 21.88 | 32.64 |
| Os08t0565200-01 | Rice | nucleus | 26.04 | 32.61 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 25.69 | 32.17 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 25.69 | 31.9 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 25.35 | 31.6 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 26.04 | 30.24 |
| CDX93190 | Canola | nucleus | 21.88 | 29.58 |
| CDY71905 | Canola | nucleus | 24.65 | 29.1 |
| CDY54455 | Canola | nucleus | 23.96 | 27.94 |
| CDX88955 | Canola | nucleus | 23.96 | 26.54 |
| CDY06088 | Canola | nucleus | 24.65 | 26.3 |
| CDX72012 | Canola | nucleus | 24.65 | 26.01 |
| CDY52095 | Canola | nucleus | 23.26 | 25.19 |
| CDY36289 | Canola | nucleus | 23.96 | 23.71 |
| CDY67039 | Canola | nucleus | 23.96 | 23.63 |
| CDY61527 | Canola | nucleus | 23.96 | 23.47 |
| CDY08557 | Canola | nucleus | 24.65 | 22.61 |
| CDY00987 | Canola | nucleus | 24.31 | 22.51 |
| CDY52149 | Canola | nucleus | 24.31 | 21.34 |
| CDY04950 | Canola | nucleus | 23.96 | 21.3 |
| CDX70151 | Canola | nucleus | 24.31 | 21.21 |
| Zm00001d049889_P001 | Maize | nucleus | 25.69 | 21.02 |
| CDX98843 | Canola | nucleus | 24.31 | 20.96 |
| EER92302 | Sorghum | nucleus | 25.0 | 20.51 |
| Zm00001d031861_P001 | Maize | nucleus | 25.35 | 20.33 |
| CDY52924 | Canola | nucleus | 23.61 | 20.24 |
| CDY52427 | Canola | nucleus | 22.22 | 19.81 |
| OQU80673 | Sorghum | nucleus | 26.04 | 19.33 |
| CDX73896 | Canola | nucleus | 25.0 | 18.85 |
| CDY07614 | Canola | nucleus | 21.88 | 18.75 |
| CDY54991 | Canola | nucleus | 21.53 | 18.4 |
| CDY33814 | Canola | nucleus | 2.43 | 8.05 |
| CDY00719 | Canola | nucleus | 5.9 | 7.17 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078EPQ3 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY02629 |
| ProteinID:CDY02629 | ProteinID:CDY02629.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00114758001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF17 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EEA74E | SEG:seg | : | : | : | : |
Description
BnaC02g08060D
Coordinates
chrLK031936:+:513389..514255
Molecular Weight (calculated)
32253.6 Da
IEP (calculated)
5.673
GRAVY (calculated)
-0.756
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEQPPTKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNHGTRIWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLL HPQQQQKEKV
101: NKNLFFSDHG SGSWDYKLDR AGGLDLGLVP SSGSHGSWSR SFNFTQEDDK TTSESSVSWL LPKRSDSQYQ ESVNAASSLT FSTKLKPMTP DYGLSNGVGS
201: RFLVEQEMKT VYDVSSSCVS ADNKESILVP SVGGGEGMHR TEVEEGTGYL EMDDLLEIDD LGLLIGKNGD FKNWCCDEFQ HPWNWFLE
101: NKNLFFSDHG SGSWDYKLDR AGGLDLGLVP SSGSHGSWSR SFNFTQEDDK TTSESSVSWL LPKRSDSQYQ ESVNAASSLT FSTKLKPMTP DYGLSNGVGS
201: RFLVEQEMKT VYDVSSSCVS ADNKESILVP SVGGGEGMHR TEVEEGTGYL EMDDLLEIDD LGLLIGKNGD FKNWCCDEFQ HPWNWFLE
001: MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
101: NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF
201: STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF
301: QHPWNWF
Arabidopsis Description
DREB2GDehydration-responsive element-binding protein 2G [Source:UniProtKB/Swiss-Prot;Acc:P61827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.