Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008200.1-P | Field mustard | nucleus | 97.47 | 97.47 |
| CDY39036 | Canola | nucleus | 97.47 | 97.47 |
| CDY70626 | Canola | nucleus | 86.36 | 83.82 |
| AT1G75490.1 | Thale cress | nucleus | 86.87 | 83.5 |
| CDX68128 | Canola | nucleus | 85.35 | 82.84 |
| CDY47519 | Canola | nucleus | 83.33 | 80.1 |
| CDY64211 | Canola | nucleus, plastid | 82.32 | 79.13 |
| CDY33815 | Canola | nucleus | 28.28 | 48.7 |
| VIT_18s0001g13320.t01 | Wine grape | nucleus | 43.43 | 42.79 |
| KRH61095 | Soybean | nucleus | 51.01 | 41.22 |
| KRH51773 | Soybean | nucleus | 51.52 | 40.96 |
| KRH05892 | Soybean | nucleus | 52.02 | 35.89 |
| KRH15125 | Soybean | nucleus | 50.51 | 35.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.85 | 34.16 |
| Solyc04g080910.1.1 | Tomato | nucleus | 42.42 | 33.87 |
| HORVU2Hr1G111510.1 | Barley | nucleus | 32.83 | 33.68 |
| TraesCS2B01G529200.1 | Wheat | plastid | 31.82 | 32.64 |
| GSMUA_Achr3P00320_001 | Banana | nucleus | 31.82 | 32.31 |
| PGSC0003DMT400009506 | Potato | nucleus | 42.42 | 32.06 |
| TraesCS1B01G256000.1 | Wheat | nucleus | 35.35 | 30.43 |
| TraesCS1A01G244800.1 | Wheat | nucleus | 35.35 | 30.17 |
| Os08t0565200-01 | Rice | nucleus | 34.85 | 30.0 |
| TraesCS1D01G244500.1 | Wheat | nucleus | 34.85 | 29.87 |
| HORVU1Hr1G063100.1 | Barley | nucleus | 35.35 | 28.23 |
| CDX93190 | Canola | nucleus | 28.79 | 26.76 |
| CDY71905 | Canola | nucleus | 31.82 | 25.82 |
| CDX70820 | Canola | nucleus | 35.86 | 25.36 |
| CDY54455 | Canola | nucleus | 30.81 | 24.7 |
| CDY58117 | Canola | nucleus | 34.85 | 23.88 |
| CDY02629 | Canola | nucleus | 34.34 | 23.61 |
| CDY06088 | Canola | nucleus | 31.31 | 22.96 |
| CDX92610 | Canola | nucleus | 35.35 | 22.88 |
| CDX72012 | Canola | nucleus | 31.31 | 22.71 |
| CDX88955 | Canola | nucleus | 29.8 | 22.69 |
| CDY52095 | Canola | nucleus | 29.8 | 22.18 |
| CDY25420 | Canola | nucleus | 35.35 | 21.34 |
| CDY61527 | Canola | nucleus | 31.31 | 21.09 |
| Zm00001d049889_P001 | Maize | nucleus | 36.87 | 20.74 |
| CDY04950 | Canola | nucleus | 33.33 | 20.37 |
| CDY67039 | Canola | nucleus | 29.8 | 20.21 |
| Zm00001d031861_P001 | Maize | nucleus | 36.36 | 20.06 |
| CDY36289 | Canola | nucleus | 29.29 | 19.93 |
| EER92302 | Sorghum | nucleus | 34.85 | 19.66 |
| CDY52149 | Canola | nucleus | 31.82 | 19.21 |
| CDY00987 | Canola | nucleus | 29.8 | 18.97 |
| OQU80673 | Sorghum | nucleus | 36.87 | 18.81 |
| CDY08557 | Canola | nucleus | 29.8 | 18.79 |
| CDY52427 | Canola | nucleus | 30.3 | 18.58 |
| CDX70151 | Canola | nucleus | 30.81 | 18.48 |
| CDY52924 | Canola | nucleus | 31.31 | 18.45 |
| CDX98843 | Canola | nucleus | 30.81 | 18.26 |
| CDY07614 | Canola | nucleus | 29.8 | 17.56 |
| CDY54991 | Canola | nucleus | 29.29 | 17.21 |
| CDX73896 | Canola | nucleus | 31.82 | 16.49 |
| CDY00719 | Canola | nucleus | 5.56 | 4.64 |
| CDY33814 | Canola | nucleus | 1.01 | 2.3 |
Protein Annotations
| MapMan:15.5.7.2 | Gene3D:3.30.730.10 | GO:A0A078G5Z5 | UniProt:A0A078G5Z5 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY20377 | ProteinID:CDY20377 | ProteinID:CDY20377.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00012397001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31241 | PANTHER:PTHR31241:SF18 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EF02C4 | SEG:seg | : | : |
Description
BnaC02g24390DBnaC02g24390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5Z5]
Coordinates
chrLK032107:+:162210..162806
Molecular Weight (calculated)
21582.7 Da
IEP (calculated)
5.627
GRAVY (calculated)
-0.718
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGANKKQRT VQASSRRGCM RGKGGPDNAS CTYKGVRQRT WGKWVAEIRE PNRGARLWLG TFDTAREAAL AYDSAARKLY GSEAHLNLPE SLRSYPETVL
101: PGTQVSHTPS SNTGGKSSDS INEESPSSSN EMSSWGTTEE ISWGHMNADL PVTDDSSIWE EATMSLGFPW VHEGDDISPF STCINGGYSN CDSFHSPL
101: PGTQVSHTPS SNTGGKSSDS INEESPSSSN EMSSWGTTEE ISWGHMNADL PVTDDSSIWE EATMSLGFPW VHEGDDISPF STCINGGYSN CDSFHSPL
001: MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
101: LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD
201: SFHSPL
Arabidopsis Description
DREB2DDehydration-responsive element-binding protein 2D [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.