Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G221900.1 | |
| TraesCS1B01G235100.2 | |
| TraesCS1D01G223600.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13430.1 | TraesCS1A01G221900.1 | AT5G05410.1 | 18552202 |
| AT5G13430.1 | TraesCS1B01G235100.2 | AT5G05410.1 | 18552202 |
| AT5G13430.1 | TraesCS1D01G223600.2 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G071350.1 | Barley | mitochondrion, plasma membrane | 90.44 | 90.11 |
| TraesCS2D01G286500.1 | Wheat | golgi, mitochondrion | 89.71 | 89.38 |
| TraesCS2A01G288200.1 | Wheat | mitochondrion | 89.71 | 89.38 |
| TraesCS2B01G305000.1 | Wheat | golgi, mitochondrion, unclear | 89.71 | 89.38 |
| CDY09795 | Canola | cytosol | 41.18 | 82.96 |
| EES10690 | Sorghum | mitochondrion | 80.15 | 80.74 |
| TraesCS6B01G229200.1 | Wheat | mitochondrion | 76.1 | 76.67 |
| Zm00001d025286_P001 | Maize | mitochondrion | 76.1 | 75.82 |
| Os04t0398500-01 | Rice | mitochondrion | 76.1 | 74.46 |
| GSMUA_Achr3P19600_001 | Banana | cytosol | 57.72 | 69.78 |
| CDX69642 | Canola | mitochondrion | 61.76 | 69.14 |
| Solyc11g039840.1.1 | Tomato | plastid | 67.28 | 69.06 |
| PGSC0003DMT400041105 | Potato | mitochondrion | 67.28 | 69.06 |
| GSMUA_Achr5P21560_001 | Banana | mitochondrion | 68.75 | 67.75 |
| KRH08411 | Soybean | mitochondrion | 65.44 | 67.42 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 67.65 | 66.91 |
| KRH70066 | Soybean | mitochondrion | 64.34 | 65.79 |
| KRH70065 | Soybean | nucleus | 63.97 | 65.66 |
| AT5G13430.1 | Thale cress | mitochondrion | 65.07 | 65.07 |
| CDX70502 | Canola | mitochondrion | 64.71 | 64.47 |
| CDX85651 | Canola | mitochondrion | 64.71 | 64.23 |
| CDX91122 | Canola | mitochondrion | 63.97 | 64.21 |
| Bra006199.1-P | Field mustard | mitochondrion | 64.34 | 63.87 |
| CDY09798 | Canola | mitochondrion | 63.6 | 63.84 |
| CDX78521 | Canola | mitochondrion | 63.24 | 63.7 |
| CDX70503 | Canola | mitochondrion | 64.34 | 63.64 |
| Bra006198.1-P | Field mustard | mitochondrion | 64.71 | 63.54 |
| CDX85650 | Canola | mitochondrion | 63.97 | 63.5 |
| VIT_14s0068g01030.t01 | Wine grape | mitochondrion | 63.97 | 63.5 |
| Bra023411.1-P | Field mustard | mitochondrion | 63.97 | 63.5 |
| AT5G13440.1 | Thale cress | mitochondrion | 63.6 | 63.14 |
| Bra023412.1-P | Field mustard | mitochondrion | 63.6 | 63.14 |
| CDX78520 | Canola | mitochondrion | 63.97 | 63.04 |
| CDY16491 | Canola | mitochondrion | 62.87 | 62.87 |
| Bra008830.1-P | Field mustard | mitochondrion | 62.87 | 62.87 |
| CDX91123 | Canola | cytosol | 64.71 | 40.18 |
Protein Annotations
| KEGG:00190+1.10.2.2 | Gene3D:2.102.10.10 | MapMan:2.4.3.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008121 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016491 | GO:GO:0016679 | GO:GO:0051537 | GO:GO:0055114 | InterPro:IPR017941 | InterPro:IPR036922 |
| PFAM:PF00355 | PFAM:PF02921 | PRINTS:PR00162 | PFscan:PS51296 | PANTHER:PTHR10134 | PANTHER:PTHR10134:SF17 |
| InterPro:Rieske_2Fe-2S | InterPro:Rieske_2Fe-2S_sf | InterPro:Rieske_Fe-S_prot | InterPro:Rieske_Fe-S_prot_C | InterPro:Rieske_TM | SUPFAM:SSF50022 |
| SUPFAM:SSF81502 | TIGRFAMs:TIGR01416 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G151800 | EnsemblPlants:TraesCS7B01G151800.1 | InterPro:Ubiquinol_cyt_c_Rdtase_Fe-S-su |
| TIGR:cd03470 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:201992184..201993002
Molecular Weight (calculated)
29995.8 Da
IEP (calculated)
9.636
GRAVY (calculated)
-0.207
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKVAGRRLS SSLSWRPAAT GGARGPLAGA GRPRRDDGDG STYQRRFAIE SPFFTAARGF YSAETLFPRN QDARLVELPA TVAALKNPNS NILYDRYNHE
101: RYPLGDPSKH AFAYFVLSGG RFVYASLLGL LVLKFVRMSA SKDVLALASL EVDLSSIEPG STVTVKWHGK PAFIRRRRDD DIKLANIVDV ASLRHPEQDA
201: ERVKNPEWLV VIGVCTHLGC IPLPNSGDFG GWFNLCHGSH YDISGRILKG PASYNLEVPT YSFLEDNKMV IG
101: RYPLGDPSKH AFAYFVLSGG RFVYASLLGL LVLKFVRMSA SKDVLALASL EVDLSSIEPG STVTVKWHGK PAFIRRRRDD DIKLANIVDV ASLRHPEQDA
201: ERVKNPEWLV VIGVCTHLGC IPLPNSGDFG GWFNLCHGSH YDISGRILKG PASYNLEVPT YSFLEDNKMV IG
001: MLRVAGRRLF SVSQRSSTAT SFVVSRDHTL SDGGGDSSSA PRSLPSADLS SYHRSLIRGF SSQVLAQGNE IGFGSEVPAT VEAVKTPNSK IVYDDHNHER
101: YPPGDPSKRA FAYFVLSGGR FVYASVLRLL VLKLIVSMSA SKDVLALASL EVDLGSIEPG TTVTVKWRGK PVFIRRRTED DIKLANSVDV GSLRDPQEDS
201: VRVKNPEWLV VVGVCTHLGC IPLPNAGDYG GWFCPCHGSH YDISGRIRKG PAPYNLEVPT YSFLEENKLL IG
101: YPPGDPSKRA FAYFVLSGGR FVYASVLRLL VLKLIVSMSA SKDVLALASL EVDLGSIEPG TTVTVKWRGK PVFIRRRTED DIKLANSVDV GSLRDPQEDS
201: VRVKNPEWLV VVGVCTHLGC IPLPNAGDYG GWFCPCHGSH YDISGRIRKG PAPYNLEVPT YSFLEENKLL IG
Arabidopsis Description
UCR1-1Cytochrome b-c1 complex subunit Rieske-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94JS0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.