Factsheet for GSMUA_AchrUn_randomP01090_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09795	Canola	cytosol	44.36	90.37
GSMUA_Achr3P19600_001	Banana	cytosol	67.64	82.67
GSMUA_Achr5P21560_001	Banana	mitochondrion	82.91	82.61
Zm00001d016619_P001	Maize	mitochondrion	74.91	75.74
KXG30298	Sorghum	mitochondrion	74.91	75.74
CDX69642	Canola	mitochondrion	66.55	75.31
Solyc11g039840.1.1	Tomato	plastid	72.36	75.09
PGSC0003DMT400041105	Potato	mitochondrion	72.36	75.09
TraesCS2D01G286500.1	Wheat	golgi, mitochondrion	74.18	74.73
TraesCS2A01G288200.1	Wheat	mitochondrion	74.18	74.73
Os02t0520800-01	Rice	mitochondrion	73.82	74.63
EES10690	Sorghum	mitochondrion	73.09	74.44
TraesCS2B01G305000.1	Wheat	golgi, mitochondrion, unclear	73.82	74.36
HORVU2Hr1G071350.1	Barley	mitochondrion, plasma membrane	73.82	74.36
KRH08411	Soybean	mitochondrion	71.27	74.24
Zm00001d025286_P001	Maize	mitochondrion	73.45	73.99
TraesCS6A01G202900.1	Wheat	mitochondrion	70.55	73.48
TraesCS6D01G187400.1	Wheat	mitochondrion	72.0	73.33
TraesCS6B01G229200.1	Wheat	mitochondrion	72.0	73.33
KRH70066	Soybean	mitochondrion	70.91	73.31
KRH70065	Soybean	nucleus	70.18	72.83
Os04t0398500-01	Rice	mitochondrion	73.45	72.66
VIT_14s0068g01030.t01	Wine grape	mitochondrion	70.91	71.17
AT5G13430.1	Thale cress	mitochondrion	70.18	70.96
CDX70502	Canola	mitochondrion	69.45	69.96
AT5G13440.1	Thale cress	mitochondrion	69.45	69.71
CDX85651	Canola	mitochondrion	69.45	69.71
CDX78521	Canola	mitochondrion	68.0	69.26
CDX78520	Canola	mitochondrion	69.45	69.2
CDX91122	Canola	mitochondrion	68.0	69.0
Bra006199.1-P	Field mustard	mitochondrion	68.73	68.98
CDX70503	Canola	mitochondrion	68.73	68.73
CDY09798	Canola	mitochondrion	67.64	68.63
CDX85650	Canola	mitochondrion	68.36	68.61
Bra023411.1-P	Field mustard	mitochondrion	68.36	68.61
Bra023412.1-P	Field mustard	mitochondrion	68.0	68.25
Bra006198.1-P	Field mustard	mitochondrion	68.73	68.23
Bra008830.1-P	Field mustard	mitochondrion	67.27	68.01
CDY16491	Canola	mitochondrion	67.27	68.01
TraesCS7B01G151800.1	Wheat	mitochondrion	66.91	67.65
HORVU6Hr1G051210.7	Barley	endoplasmic reticulum	66.91	66.91
CDX91123	Canola	cytosol	69.82	43.84

Protein Annotations

KEGG:00190+1.10.2.2	Gene3D:2.102.10.10	MapMan:2.4.3.4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006091	GO:GO:0006810	GO:GO:0008121	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016679	GO:GO:0022900
GO:GO:0051537	GO:GO:0055114	GO:GO:0070469	GO:GO:1902600	EnsemblPlantsGene:GSMUA_AchrUn_randomG01090_001	EnsemblPlants:GSMUA_AchrUn_randomP01090_001
EnsemblPlants:GSMUA_AchrUn_randomT01090_001	InterPro:IPR017941	InterPro:IPR036922	UniProt:M0U5C1	PFAM:PF00355	PFAM:PF02921
PRINTS:PR00162	PFscan:PS51296	PANTHER:PTHR10134	PANTHER:PTHR10134:SF17	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf
InterPro:Rieske_Fe-S_prot	InterPro:Rieske_Fe-S_prot_C	InterPro:Rieske_TM	SUPFAM:SSF50022	SUPFAM:SSF81502	TIGRFAMs:TIGR01416
TMHMM:TMhelix	UniParc:UPI000296D8A6	InterPro:Ubiquinol_cyt_c_Rdtase_Fe-S-su	:	:	:

Description

Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01090_001]

Coordinates

chrchrUn_random:+:3685067..3688884

Molecular Weight (calculated)

30038.0 Da

IEP (calculated)

9.153

GRAVY (calculated)

-0.082

Length

275 amino acids

Sequence
(BLAST)

001: MLRVAGRRIG ALSRWQTPTA SVVSSRNPVH GFGDSSADDS WQISAPRARF AFQSPLLAAV RGYASEKLVP GYADLGLADL PATVAAIKNP TSKIVYDEHN
101: HERHPPGDPS KRAFAYFVLT GGRFVYASLL RLLILKFVLS MSASKDVLAL ASLEVDLSSI EPGSTVTVKW RGKPVFIRRR TEDDINLANS VNVLSLRDPQ
201: ADSDRVKNPE WLVVVGVCTH LGCIPLPNAG DFGGWFCPCH GSHYDISGRI RKGPAPFNLE VPQYSFLDEN KLLIG

Best Arabidopsis Sequence Match ( AT5G13430.1 )
(BLAST)

001: MLRVAGRRLF SVSQRSSTAT SFVVSRDHTL SDGGGDSSSA PRSLPSADLS SYHRSLIRGF SSQVLAQGNE IGFGSEVPAT VEAVKTPNSK IVYDDHNHER
101: YPPGDPSKRA FAYFVLSGGR FVYASVLRLL VLKLIVSMSA SKDVLALASL EVDLGSIEPG TTVTVKWRGK PVFIRRRTED DIKLANSVDV GSLRDPQEDS
201: VRVKNPEWLV VVGVCTHLGC IPLPNAGDYG GWFCPCHGSH YDISGRIRKG PAPYNLEVPT YSFLEENKLL IG

Arabidopsis Description

UCR1-1Cytochrome b-c1 complex subunit Rieske-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94JS0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.