CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG21735

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13430.1	KXG21735	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09795	Canola	cytosol	46.3	92.59
Zm00001d025286_P001	Maize	mitochondrion	90.37	89.38
HORVU2Hr1G071350.1	Barley	mitochondrion, plasma membrane	88.52	87.55
TraesCS2D01G286500.1	Wheat	golgi, mitochondrion	88.52	87.55
TraesCS2A01G288200.1	Wheat	mitochondrion	88.52	87.55
TraesCS2B01G305000.1	Wheat	golgi, mitochondrion, unclear	88.15	87.18
KXG30298	Sorghum	mitochondrion	87.41	86.76
Os04t0398500-01	Rice	mitochondrion	87.04	84.53
TraesCS7B01G151800.1	Wheat	mitochondrion	80.74	80.15
GSMUA_Achr3P19600_001	Banana	cytosol	65.19	78.22
CDX69642	Canola	mitochondrion	69.63	77.37
KRH08411	Soybean	mitochondrion	73.33	75.0
Solyc11g039840.1.1	Tomato	plastid	73.33	74.72
PGSC0003DMT400041105	Potato	mitochondrion	73.33	74.72
GSMUA_Achr5P21560_001	Banana	mitochondrion	75.19	73.55
KRH70065	Soybean	nucleus	71.85	73.21
GSMUA_AchrUn_...	Banana	mitochondrion	74.44	73.09
AT5G13430.1	Thale cress	mitochondrion	73.33	72.79
KRH70066	Soybean	mitochondrion	71.48	72.56
CDX85651	Canola	mitochondrion	73.33	72.26
CDX70502	Canola	mitochondrion	72.96	72.16
VIT_14s0068g01030.t01	Wine grape	mitochondrion	72.96	71.9
CDX91122	Canola	mitochondrion	71.85	71.59
Bra023411.1-P	Field mustard	mitochondrion	72.59	71.53
CDX70503	Canola	mitochondrion	72.59	71.27
CDY09798	Canola	mitochondrion	71.48	71.22
CDX78521	Canola	mitochondrion	71.11	71.11
CDY16491	Canola	mitochondrion	71.48	70.96
Bra008830.1-P	Field mustard	mitochondrion	71.48	70.96
Bra006199.1-P	Field mustard	mitochondrion	71.85	70.8
CDX78520	Canola	mitochondrion	72.22	70.65
CDX85650	Canola	mitochondrion	71.48	70.44
AT5G13440.1	Thale cress	mitochondrion	71.48	70.44
Bra023412.1-P	Field mustard	mitochondrion	71.11	70.07
Bra006198.1-P	Field mustard	mitochondrion	71.48	69.68
CDX91123	Canola	cytosol	73.33	45.21

Protein Annotations

KEGG:00190+1.10.2.2	Gene3D:2.102.10.10	MapMan:2.4.3.4	EntrezGene:8072038	UniProt:C5YFA1	EnsemblPlants:EES10690
ProteinID:EES10690	ProteinID:EES10690.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006091	GO:GO:0006810	GO:GO:0008121	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016491	GO:GO:0016679	GO:GO:0022900	GO:GO:0051537	GO:GO:0055114
GO:GO:0070469	GO:GO:1902600	InterPro:IPR017941	InterPro:IPR036922	PFAM:PF00355	PFAM:PF02921
PRINTS:PR00162	PFscan:PS51296	PANTHER:PTHR10134	PANTHER:PTHR10134:SF17	MetaCyc:PWY-3781	MetaCyc:PWY-6692
MetaCyc:PWY-7082	MetaCyc:PWY-7279	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	InterPro:Rieske_Fe-S_prot	InterPro:Rieske_Fe-S_prot_C
InterPro:Rieske_TM	EnsemblPlantsGene:SORBI_3006G058900	SUPFAM:SSF50022	SUPFAM:SSF81502	unigene:Sbi.3500	TIGRFAMs:TIGR01416
UniParc:UPI0001A86B06	InterPro:Ubiquinol_cyt_c_Rdtase_Fe-S-su	RefSeq:XP_002446362.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:40804469..40808831

Molecular Weight (calculated)

29543.2 Da

IEP (calculated)

9.397

GRAVY (calculated)

-0.196

Length

270 amino acids

Sequence
(BLAST)

001: MLRVAGRRLS SSLSWRPAAA AARGPLAGAG APDRDDDSAR GRSQPRFSID SPFFVASRGF SSTETLVPRN QDAGFPATVA AVKNPNPKVV YDEYNHERYP
101: PGDPSKRAFA YFVLSGGRFI YASLLRLLVL KFVLSMSASK DVLALASLEV DLSSIEPGTT VTVKWRGKPV FIRRRTEDDI KLANSVDVAS LRHPEQDAER
201: VKNPEWLVVI GVCTHLGCIP LPNAGDFGGW FCPCHGSHYD ISGRIRKGPA PFNLEVPTYS FLEENKLLIG

Best Arabidopsis Sequence Match ( AT5G13430.1 )
(BLAST)

001: MLRVAGRRLF SVSQRSSTAT SFVVSRDHTL SDGGGDSSSA PRSLPSADLS SYHRSLIRGF SSQVLAQGNE IGFGSEVPAT VEAVKTPNSK IVYDDHNHER
101: YPPGDPSKRA FAYFVLSGGR FVYASVLRLL VLKLIVSMSA SKDVLALASL EVDLGSIEPG TTVTVKWRGK PVFIRRRTED DIKLANSVDV GSLRDPQEDS
201: VRVKNPEWLV VVGVCTHLGC IPLPNAGDYG GWFCPCHGSH YDISGRIRKG PAPYNLEVPT YSFLEENKLL IG

Arabidopsis Description

UCR1-1Cytochrome b-c1 complex subunit Rieske-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94JS0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.