CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG21735

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13430.1	KXG21735	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016619_P001	Maize	mitochondrion	95.22	95.22
CDY09795	Canola	cytosol	45.22	91.11
EES10690	Sorghum	mitochondrion	86.76	87.41
Os02t0520800-01	Rice	mitochondrion	86.4	86.4
TraesCS6D01G187400.1	Wheat	mitochondrion	84.56	85.19
TraesCS6B01G229200.1	Wheat	mitochondrion	84.19	84.81
TraesCS6A01G202900.1	Wheat	mitochondrion	81.99	84.47
GSMUA_Achr3P19600_001	Banana	cytosol	63.97	77.33
Solyc11g039840.1.1	Tomato	plastid	74.26	76.23
PGSC0003DMT400041105	Potato	mitochondrion	74.26	76.23
GSMUA_Achr5P21560_001	Banana	mitochondrion	76.47	75.36
CDX69642	Canola	mitochondrion	67.28	75.31
GSMUA_AchrUn_...	Banana	mitochondrion	75.74	74.91
KRH08411	Soybean	mitochondrion	70.96	73.11
HORVU6Hr1G051210.7	Barley	endoplasmic reticulum	73.53	72.73
KRH70065	Soybean	nucleus	70.22	72.08
KRH70066	Soybean	mitochondrion	70.22	71.8
VIT_14s0068g01030.t01	Wine grape	mitochondrion	71.32	70.8
AT5G13430.1	Thale cress	mitochondrion	70.22	70.22
CDX85651	Canola	mitochondrion	70.59	70.07
CDX70502	Canola	mitochondrion	69.85	69.6
CDX91122	Canola	mitochondrion	69.12	69.37
Bra023411.1-P	Field mustard	mitochondrion	69.85	69.34
CDX78521	Canola	mitochondrion	68.75	69.26
CDX70503	Canola	mitochondrion	69.85	69.09
CDY09798	Canola	mitochondrion	68.75	69.0
Bra006199.1-P	Field mustard	mitochondrion	69.49	68.98
CDX78520	Canola	mitochondrion	69.85	68.84
CDX85650	Canola	mitochondrion	69.12	68.61
AT5G13440.1	Thale cress	mitochondrion	69.12	68.61
CDY16491	Canola	mitochondrion	68.38	68.38
Bra008830.1-P	Field mustard	mitochondrion	68.38	68.38
Bra023412.1-P	Field mustard	mitochondrion	68.75	68.25
Bra006198.1-P	Field mustard	mitochondrion	68.75	67.51
CDX91123	Canola	cytosol	70.59	43.84

Protein Annotations

KEGG:00190+1.10.2.2	Gene3D:2.102.10.10	MapMan:2.4.3.4	UniProt:A0A194YPY7	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005743	GO:GO:0006091	GO:GO:0006810	GO:GO:0008121	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016679
GO:GO:0022900	GO:GO:0051537	GO:GO:0055114	GO:GO:0070469	GO:GO:1902600	InterPro:IPR017941
InterPro:IPR036922	EnsemblPlants:KXG30298	ProteinID:KXG30298	ProteinID:KXG30298.1	PFAM:PF00355	PFAM:PF02921
PRINTS:PR00162	PFscan:PS51296	PANTHER:PTHR10134	PANTHER:PTHR10134:SF17	MetaCyc:PWY-3781	MetaCyc:PWY-6692
MetaCyc:PWY-7082	MetaCyc:PWY-7279	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	InterPro:Rieske_Fe-S_prot	InterPro:Rieske_Fe-S_prot_C
InterPro:Rieske_TM	EnsemblPlantsGene:SORBI_3004G159000	SUPFAM:SSF50022	SUPFAM:SSF81502	TIGRFAMs:TIGR01416	TMHMM:TMhelix
UniParc:UPI0001C80C7E	InterPro:Ubiquinol_cyt_c_Rdtase_Fe-S-su	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:50520354..50523531

Molecular Weight (calculated)

29716.6 Da

IEP (calculated)

9.179

GRAVY (calculated)

-0.157

Length

272 amino acids

Sequence
(BLAST)

001: MLRVAGRRLS SALSWRPATA AAGTRGPLAG TLPGRDDDDT RDRRARFAID SPFFAAARGF SAETLVPRNQ DVGLAELPPT VAAVKNPSGK IVYDESNHER
101: YPPGDPSKRA FAYFVLSGGR FIYASLLRLL ILKFVLSMSA SKDVLALASL EVDLSSIEPG TTVTVKWRGK PVFIRRRTDD DIKLANSVDV ASLRHPEQDA
201: ERVKNPEWLV VIGVCTHLGC IPLPNAGDFG GWFCPCHGSH YDISGRIRKG PAPFNLEVPT YSFLEDNKLL IG

Best Arabidopsis Sequence Match ( AT5G13430.1 )
(BLAST)

001: MLRVAGRRLF SVSQRSSTAT SFVVSRDHTL SDGGGDSSSA PRSLPSADLS SYHRSLIRGF SSQVLAQGNE IGFGSEVPAT VEAVKTPNSK IVYDDHNHER
101: YPPGDPSKRA FAYFVLSGGR FVYASVLRLL VLKLIVSMSA SKDVLALASL EVDLGSIEPG TTVTVKWRGK PVFIRRRTED DIKLANSVDV GSLRDPQEDS
201: VRVKNPEWLV VVGVCTHLGC IPLPNAGDYG GWFCPCHGSH YDISGRIRKG PAPYNLEVPT YSFLEENKLL IG

Arabidopsis Description

UCR1-1Cytochrome b-c1 complex subunit Rieske-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94JS0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.