Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09795 | Canola | cytosol | 52.89 | 88.15 |
| CDX69642 | Canola | mitochondrion | 76.0 | 70.37 |
| KRH08411 | Soybean | mitochondrion | 79.56 | 67.8 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 82.67 | 67.64 |
| Solyc11g039840.1.1 | Tomato | plastid | 78.67 | 66.79 |
| PGSC0003DMT400041105 | Potato | mitochondrion | 78.67 | 66.79 |
| VIT_14s0068g01030.t01 | Wine grape | mitochondrion | 81.33 | 66.79 |
| KRH70065 | Soybean | nucleus | 78.22 | 66.42 |
| GSMUA_Achr5P21560_001 | Banana | mitochondrion | 81.33 | 66.3 |
| KRH70066 | Soybean | mitochondrion | 78.22 | 66.17 |
| Zm00001d025286_P001 | Maize | mitochondrion | 79.56 | 65.57 |
| EES10690 | Sorghum | mitochondrion | 78.22 | 65.19 |
| TraesCS6A01G202900.1 | Wheat | mitochondrion | 76.44 | 65.15 |
| Zm00001d016619_P001 | Maize | mitochondrion | 78.67 | 65.07 |
| TraesCS6D01G187400.1 | Wheat | mitochondrion | 76.89 | 64.07 |
| TraesCS6B01G229200.1 | Wheat | mitochondrion | 76.89 | 64.07 |
| KXG30298 | Sorghum | mitochondrion | 77.33 | 63.97 |
| Os02t0520800-01 | Rice | mitochondrion | 77.33 | 63.97 |
| CDY09798 | Canola | mitochondrion | 76.89 | 63.84 |
| AT5G13440.1 | Thale cress | mitochondrion | 77.33 | 63.5 |
| HORVU2Hr1G071350.1 | Barley | mitochondrion, plasma membrane | 76.89 | 63.37 |
| HORVU6Hr1G051210.7 | Barley | endoplasmic reticulum | 77.33 | 63.27 |
| AT5G13430.1 | Thale cress | mitochondrion | 76.44 | 63.24 |
| TraesCS2D01G286500.1 | Wheat | golgi, mitochondrion | 76.44 | 63.0 |
| TraesCS2B01G305000.1 | Wheat | golgi, mitochondrion, unclear | 76.44 | 63.0 |
| TraesCS2A01G288200.1 | Wheat | mitochondrion | 76.44 | 63.0 |
| Os04t0398500-01 | Rice | mitochondrion | 77.78 | 62.95 |
| Bra008830.1-P | Field mustard | mitochondrion | 76.0 | 62.87 |
| CDY16491 | Canola | mitochondrion | 76.0 | 62.87 |
| CDX85651 | Canola | mitochondrion | 76.44 | 62.77 |
| CDX91122 | Canola | mitochondrion | 75.56 | 62.73 |
| CDX70502 | Canola | mitochondrion | 76.0 | 62.64 |
| CDX85650 | Canola | mitochondrion | 76.0 | 62.41 |
| CDX78520 | Canola | mitochondrion | 76.44 | 62.32 |
| CDX78521 | Canola | mitochondrion | 74.67 | 62.22 |
| Bra023411.1-P | Field mustard | mitochondrion | 75.56 | 62.04 |
| Bra006199.1-P | Field mustard | mitochondrion | 75.56 | 62.04 |
| Bra023412.1-P | Field mustard | mitochondrion | 75.56 | 62.04 |
| CDX70503 | Canola | mitochondrion | 75.56 | 61.82 |
| Bra006198.1-P | Field mustard | mitochondrion | 75.11 | 61.01 |
| TraesCS7B01G151800.1 | Wheat | mitochondrion | 69.78 | 57.72 |
| CDX91123 | Canola | cytosol | 76.44 | 39.27 |
Protein Annotations
| KEGG:00190+1.10.2.2 | Gene3D:2.102.10.10 | MapMan:2.4.3.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005743 | GO:GO:0006091 | GO:GO:0006810 | GO:GO:0008121 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016679 | GO:GO:0022900 |
| GO:GO:0051537 | GO:GO:0055114 | GO:GO:0070469 | GO:GO:1902600 | EnsemblPlantsGene:GSMUA_Achr3G19600_001 | EnsemblPlants:GSMUA_Achr3P19600_001 |
| EnsemblPlants:GSMUA_Achr3T19600_001 | InterPro:IPR017941 | InterPro:IPR036922 | UniProt:M0SG26 | PFAM:PF00355 | PFAM:PF02921 |
| PRINTS:PR00162 | PFscan:PS51296 | PANTHER:PTHR10134 | PANTHER:PTHR10134:SF17 | InterPro:Rieske_2Fe-2S | InterPro:Rieske_2Fe-2S_sf |
| InterPro:Rieske_Fe-S_prot | InterPro:Rieske_Fe-S_prot_C | InterPro:Rieske_TM | SUPFAM:SSF50022 | SUPFAM:SSF81502 | TIGRFAMs:TIGR01416 |
| TMHMM:TMhelix | UniParc:UPI0002965C90 | InterPro:Ubiquinol_cyt_c_Rdtase_Fe-S-su | : | : | : |
Description
Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr3G19600_001]
Coordinates
chr3:+:20959929..20961158
Molecular Weight (calculated)
24603.5 Da
IEP (calculated)
6.899
GRAVY (calculated)
-0.057
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDECVGLS NCGLATQSLT QNQDLGLVDL PATVAAAKNP TSKIVYDEYN HERFPPGDPS KRAFAYFVLT GGRFVYASLL RLLILKFVLS MSASKDVLAL
101: ASLEVDLSNI EPGNTVTVKW RGKPVFIRRR TESDIKMANS VDVSSLRDPQ EDSARVKNPE WLIVVGVCTH LGCIPLPNAG DFGGWFCPCH GSHYDVSGRI
201: RKGPAPFNLE VPTYTFLDEN KLLVG
101: ASLEVDLSNI EPGNTVTVKW RGKPVFIRRR TESDIKMANS VDVSSLRDPQ EDSARVKNPE WLIVVGVCTH LGCIPLPNAG DFGGWFCPCH GSHYDVSGRI
201: RKGPAPFNLE VPTYTFLDEN KLLVG
001: MLRVAGRRLF SVSQRSSTAT SFVLSRDHTL SDGGNSSSAS RSVPSADLSS FNSYHRSVIR GFASQVITQG NEIGFGSEVP ATVEAVKTPN SKIVYDDHNH
101: ERYPPGDPSK RAFAYFVLSG GRFVYASVLR LLVLKLIVSM SASKDVLALA SLEVDLGSIE PGTTVTVKWR GKPVFIRRRT EDDIKLANSV DVGSLRDPQE
201: DSVRVKNPEW LIVVGVCTHL GCIPLPNAGD YGGWFCPCHG SHYDISGRIR KGPAPYNLEV PTYSFLEENK LLIG
101: ERYPPGDPSK RAFAYFVLSG GRFVYASVLR LLVLKLIVSM SASKDVLALA SLEVDLGSIE PGTTVTVKWR GKPVFIRRRT EDDIKLANSV DVGSLRDPQE
201: DSVRVKNPEW LIVVGVCTHL GCIPLPNAGD YGGWFCPCHG SHYDISGRIR KGPAPYNLEV PTYSFLEENK LLIG
Arabidopsis Description
UCR1-2Cytochrome b-c1 complex subunit Rieske-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LYR2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.