Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 9
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra005852.1-P | |
| Bra009112.1-P | |
| Bra028759.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13430.1 | Bra005852.1-P | AT5G05410.1 | 18552202 |
| AT5G13430.1 | Bra009112.1-P | AT5G05410.1 | 18552202 |
| AT5G13430.1 | Bra028759.1-P | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85650 | Canola | mitochondrion | 99.64 | 99.64 |
| CDX91122 | Canola | mitochondrion | 96.35 | 97.42 |
| Bra006199.1-P | Field mustard | mitochondrion | 92.34 | 92.34 |
| AT5G13440.1 | Thale cress | mitochondrion | 91.61 | 91.61 |
| Bra008830.1-P | Field mustard | mitochondrion | 90.15 | 90.81 |
| AT5G13430.1 | Thale cress | mitochondrion | 90.15 | 90.81 |
| Bra023411.1-P | Field mustard | mitochondrion | 90.15 | 90.15 |
| Bra006198.1-P | Field mustard | mitochondrion | 89.05 | 88.09 |
| GSMUA_Achr3P19600_001 | Banana | cytosol | 62.04 | 75.56 |
| Solyc11g039840.1.1 | Tomato | plastid | 71.17 | 73.58 |
| PGSC0003DMT400041105 | Potato | mitochondrion | 71.17 | 73.58 |
| VIT_01s0150g00160.t01 | Wine grape | mitochondrion | 71.17 | 71.69 |
| Os02t0520800-01 | Rice | mitochondrion | 71.17 | 71.69 |
| KRH70066 | Soybean | mitochondrion | 69.34 | 71.43 |
| EES10690 | Sorghum | mitochondrion | 70.07 | 71.11 |
| Zm00001d025286_P001 | Maize | mitochondrion | 70.8 | 71.06 |
| KRH70065 | Soybean | nucleus | 68.61 | 70.94 |
| TraesCS6A01G202900.1 | Wheat | mitochondrion | 68.25 | 70.83 |
| KRH08411 | Soybean | mitochondrion | 68.25 | 70.83 |
| Zm00001d016619_P001 | Maize | mitochondrion | 70.07 | 70.59 |
| TraesCS6D01G187400.1 | Wheat | mitochondrion | 69.34 | 70.37 |
| TraesCS6B01G229200.1 | Wheat | mitochondrion | 68.98 | 70.0 |
| HORVU2Hr1G071350.1 | Barley | mitochondrion, plasma membrane | 68.98 | 69.23 |
| TraesCS2A01G288200.1 | Wheat | mitochondrion | 68.98 | 69.23 |
| TraesCS2B01G305000.1 | Wheat | golgi, mitochondrion, unclear | 68.98 | 69.23 |
| TraesCS2D01G286500.1 | Wheat | golgi, mitochondrion | 68.98 | 69.23 |
| Os04t0398500-01 | Rice | mitochondrion | 70.07 | 69.06 |
| KXG30298 | Sorghum | mitochondrion | 68.25 | 68.75 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 68.25 | 68.0 |
| GSMUA_Achr5P21560_001 | Banana | mitochondrion | 68.25 | 67.75 |
| VIT_14s0068g01030.t01 | Wine grape | mitochondrion | 67.52 | 67.52 |
| HORVU6Hr1G051210.7 | Barley | endoplasmic reticulum | 66.79 | 66.55 |
| TraesCS7B01G151800.1 | Wheat | mitochondrion | 63.14 | 63.6 |
Protein Annotations
| KEGG:00190+1.10.2.2 | Gene3D:2.102.10.10 | MapMan:2.4.3.4 | EnsemblPlantsGene:Bra023412 | EnsemblPlants:Bra023412.1 | EnsemblPlants:Bra023412.1-P |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006091 | GO:GO:0006810 |
| GO:GO:0008121 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016491 |
| GO:GO:0016679 | GO:GO:0022900 | GO:GO:0051537 | GO:GO:0055114 | GO:GO:0070469 | GO:GO:1902600 |
| InterPro:IPR017941 | InterPro:IPR036922 | UniProt:M4E3Q9 | PFAM:PF00355 | PFAM:PF02921 | PRINTS:PR00162 |
| PFscan:PS51296 | PANTHER:PTHR10134 | PANTHER:PTHR10134:SF17 | InterPro:Rieske_2Fe-2S | InterPro:Rieske_2Fe-2S_sf | InterPro:Rieske_Fe-S_prot |
| InterPro:Rieske_Fe-S_prot_C | InterPro:Rieske_TM | SUPFAM:SSF50022 | SUPFAM:SSF81502 | TIGRFAMs:TIGR01416 | UniParc:UPI000254348A |
| InterPro:Ubiquinol_cyt_c_Rdtase_Fe-S-su | : | : | : | : | : |
Description
AT5G13440 (E=6e-146) | ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative
Coordinates
chrA02:-:3274569..3276152
Molecular Weight (calculated)
30027.7 Da
IEP (calculated)
8.212
GRAVY (calculated)
-0.176
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRVAGRRLL SLQQRSSTAT SFVLSRDHTI SKEGGEDSTR SAAPSADLSC FSSYHRSLLR GFSSQVITQG NEIGFASEVP ATVEAVKTPN SKIVYDDHNH
101: ERYPPGDPSK RAFAYFVLSG GRFVYASVLR LLVLNLIVSM SASKDVLALA SLEVDLGSIE PGTTVTVKWR GKPVFIRRRT EDDIKLANSV DLGSLRDPQE
201: DSVRVKNPEW LVVVGVCTHL GCIPLPNAGD YGGWFCPCHG SHYDISGRIR KGPAPYNLEV PTYSFLEENK LLIG
101: ERYPPGDPSK RAFAYFVLSG GRFVYASVLR LLVLNLIVSM SASKDVLALA SLEVDLGSIE PGTTVTVKWR GKPVFIRRRT EDDIKLANSV DLGSLRDPQE
201: DSVRVKNPEW LVVVGVCTHL GCIPLPNAGD YGGWFCPCHG SHYDISGRIR KGPAPYNLEV PTYSFLEENK LLIG
001: MLRVAGRRLF SVSQRSSTAT SFVLSRDHTL SDGGNSSSAS RSVPSADLSS FNSYHRSVIR GFASQVITQG NEIGFGSEVP ATVEAVKTPN SKIVYDDHNH
101: ERYPPGDPSK RAFAYFVLSG GRFVYASVLR LLVLKLIVSM SASKDVLALA SLEVDLGSIE PGTTVTVKWR GKPVFIRRRT EDDIKLANSV DVGSLRDPQE
201: DSVRVKNPEW LIVVGVCTHL GCIPLPNAGD YGGWFCPCHG SHYDISGRIR KGPAPYNLEV PTYSFLEENK LLIG
101: ERYPPGDPSK RAFAYFVLSG GRFVYASVLR LLVLKLIVSM SASKDVLALA SLEVDLGSIE PGTTVTVKWR GKPVFIRRRT EDDIKLANSV DVGSLRDPQE
201: DSVRVKNPEW LIVVGVCTHL GCIPLPNAGD YGGWFCPCHG SHYDISGRIR KGPAPYNLEV PTYSFLEENK LLIG
Arabidopsis Description
UCR1-2Cytochrome b-c1 complex subunit Rieske-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LYR2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.