Factsheet for Os02t0520800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
nucleus: 19621931
plastid: 21433289
mitochondrion: 23027867
plasma membrane: 27800704
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09795	Canola	cytosol	46.69	94.07
Zm00001d016619_P001	Maize	mitochondrion	87.5	87.5
KXG30298	Sorghum	mitochondrion	86.4	86.4
TraesCS6D01G187400.1	Wheat	mitochondrion	81.99	82.59
TraesCS6B01G229200.1	Wheat	mitochondrion	81.62	82.22
TraesCS6A01G202900.1	Wheat	mitochondrion	79.78	82.2
Os04t0398500-01	Rice	mitochondrion	81.99	80.22
CDX69642	Canola	mitochondrion	69.85	78.19
GSMUA_Achr3P19600_001	Banana	cytosol	63.97	77.33
Solyc11g039840.1.1	Tomato	plastid	73.53	75.47
PGSC0003DMT400041105	Potato	mitochondrion	73.53	75.47
KRH08411	Soybean	mitochondrion	71.69	73.86
GSMUA_AchrUn_...	Banana	mitochondrion	74.63	73.82
GSMUA_Achr5P21560_001	Banana	mitochondrion	73.9	72.83
CDX85651	Canola	mitochondrion	72.79	72.26
CDX70502	Canola	mitochondrion	72.43	72.16
KRH70065	Soybean	nucleus	70.22	72.08
AT5G13430.1	Thale cress	mitochondrion	72.06	72.06
HORVU6Hr1G051210.7	Barley	endoplasmic reticulum	72.79	72.0
KRH70066	Soybean	mitochondrion	70.22	71.8
CDX91122	Canola	mitochondrion	71.32	71.59
CDX85650	Canola	mitochondrion	72.06	71.53
Bra023411.1-P	Field mustard	mitochondrion	72.06	71.53
CDX78521	Canola	mitochondrion	70.96	71.48
CDX70503	Canola	mitochondrion	72.06	71.27
CDY09798	Canola	mitochondrion	70.96	71.22
Bra023412.1-P	Field mustard	mitochondrion	71.69	71.17
Bra006199.1-P	Field mustard	mitochondrion	71.69	71.17
CDX78520	Canola	mitochondrion	72.06	71.01
CDY16491	Canola	mitochondrion	70.96	70.96
Bra008830.1-P	Field mustard	mitochondrion	70.96	70.96
VIT_14s0068g01030.t01	Wine grape	mitochondrion	70.96	70.44
AT5G13440.1	Thale cress	mitochondrion	70.96	70.44
Bra006198.1-P	Field mustard	mitochondrion	70.96	69.68
CDX91123	Canola	cytosol	72.79	45.21

Protein Annotations

KEGG:00190+1.10.2.2	Gene3D:2.102.10.10	MapMan:2.4.3.4	EntrezGene:4329497	EMBL:AK102815	ProteinID:BAD26134.1
ProteinID:BAD26320.1	ProteinID:BAF08889.1	ProteinID:BAS78949.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006091
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008121	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016679
GO:GO:0022900	GO:GO:0051537	GO:GO:0055114	GO:GO:0070469	InterPro:IPR017941	InterPro:IPR036922
EnsemblPlantsGene:Os02g0520800	EnsemblPlants:Os02t0520800-01	PFAM:PF00355	PFAM:PF02921	PRINTS:PR00162	PFscan:PS51296
PANTHER:PTHR10134	PANTHER:PTHR10134:SF17	UniProt:Q6H4M9	InterPro:Rieske_2Fe-2S	InterPro:Rieske_2Fe-2S_sf	InterPro:Rieske_Fe-S_prot
InterPro:Rieske_Fe-S_prot_C	InterPro:Rieske_TM	SUPFAM:SSF50022	SUPFAM:SSF81502	TIGRFAMs:TIGR01416	TMHMM:TMhelix
UniParc:UPI00003B4623	InterPro:Ubiquinol_cyt_c_Rdtase_Fe-S-su	RefSeq:XP_015627062.1	SEG:seg	:	:

Description

Similar to Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (EC 1.10.2.2) (Rieske iron-sulfur protein) (RISP). (Os02t0520800-01)

Coordinates

chr2:-:18980950..18984192

Molecular Weight (calculated)

29821.6 Da

IEP (calculated)

8.598

GRAVY (calculated)

-0.164

Length

272 amino acids

Sequence
(BLAST)

001: MLRVAGRRLT TALAWRPAAA AGARGPLAGG SLPGDDEFSR EPQRPRFAVD SPFFAASRGF SSETLVPRNQ DVSLTELPAT VSAVKNPSAK IVYDEYNHER
101: YQPGDPSKRA FAYFVLSGGR FIYASLLRLL VLKFVLSMSA SKDVLALASL EVDLSSIEPG TTVTVKWRGK PVFIRRRTEE DINLANSVDI GSLRDPQQDA
201: ERVKNPEWLV VIGVCTHLGC IPLPNAGDFG GWFCPCHGSH YDISGRIRKG PAPYNLEVPT YSFLEENKLL IG

Best Arabidopsis Sequence Match ( AT5G13430.1 )
(BLAST)

001: MLRVAGRRLF SVSQRSSTAT SFVVSRDHTL SDGGGDSSSA PRSLPSADLS SYHRSLIRGF SSQVLAQGNE IGFGSEVPAT VEAVKTPNSK IVYDDHNHER
101: YPPGDPSKRA FAYFVLSGGR FVYASVLRLL VLKLIVSMSA SKDVLALASL EVDLGSIEPG TTVTVKWRGK PVFIRRRTED DIKLANSVDV GSLRDPQEDS
201: VRVKNPEWLV VVGVCTHLGC IPLPNAGDYG GWFCPCHGSH YDISGRIRKG PAPYNLEVPT YSFLEENKLL IG

Arabidopsis Description

UCR1-1Cytochrome b-c1 complex subunit Rieske-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q94JS0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.