Factsheet for Bra012269.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005852.1-P
Bra009112.1-P
Bra028759.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21130.1	Bra005852.1-P	AT5G05410.1	18552202
AT1G21130.1	Bra009112.1-P	AT5G05410.1	18552202
AT1G21130.1	Bra028759.1-P	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01334	Canola	cytosol	100.0	100.0
Bra016433.1-P	Field mustard	cytosol	92.68	91.94
Bra012268.1-P	Field mustard	cytosol	91.87	91.87
AT1G21130.1	Thale cress	cytosol	91.6	90.62
Bra025875.1-P	Field mustard	cytosol	91.6	90.62
Bra025874.1-P	Field mustard	cytosol	90.79	90.05
AT1G21110.1	Thale cress	cytosol	89.97	89.01
Bra016432.1-P	Field mustard	cytosol	89.7	88.5
Bra012270.1-P	Field mustard	cytosol	87.26	85.64
AT1G21120.2	Thale cress	cytosol	92.14	80.76
Bra003707.1-P	Field mustard	cytosol	72.36	74.58
Bra015719.1-P	Field mustard	cytosol	72.9	72.7
Bra003682.1-P	Field mustard	cytosol	56.91	59.32
Bra011292.1-P	Field mustard	cytosol	55.28	54.69
Bra008316.1-P	Field mustard	cytosol	55.28	54.4
Bra033733.1-P	Field mustard	cytosol	56.1	54.33
Bra008313.1-P	Field mustard	cytosol	55.56	53.81
Bra010226.1-P	Field mustard	cytosol	55.28	53.54
Bra003681.1-P	Field mustard	extracellular	48.78	53.41
Bra015664.1-P	Field mustard	cytosol	47.43	52.71
Bra027815.1-P	Field mustard	cytosol	53.66	52.38
Bra003680.1-P	Field mustard	cytosol	52.3	51.06
Bra003009.1-P	Field mustard	cytosol	42.28	44.57
Bra003007.1-P	Field mustard	cytosol	43.9	44.51
Bra019031.1-P	Field mustard	cytosol	44.17	44.41
Bra029041.1-P	Field mustard	cytosol	43.36	43.96
Bra026320.1-P	Field mustard	cytosol	34.42	42.91
Bra022700.1-P	Field mustard	cytosol	40.92	41.83
Bra035481.1-P	Field mustard	cytosol	38.21	39.61
Bra033498.1-P	Field mustard	cytosol	31.17	39.25
VIT_10s0003g04160.t01	Wine grape	cytosol	36.86	37.99
Bra035482.1-P	Field mustard	cytosol	34.96	35.44
Bra040689.1-P	Field mustard	cytosol	30.35	31.2
Bra034677.1-P	Field mustard	cytosol	28.18	28.26
Bra038396.1-P	Field mustard	cytosol	27.91	28.07
Bra017699.1-P	Field mustard	cytosol	27.64	27.87
Bra017700.1-P	Field mustard	cytosol	27.37	27.52
Bra034678.1-P	Field mustard	cytosol	18.43	24.2

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:50.2.1	EnsemblPlantsGene:Bra012269	EnsemblPlants:Bra012269.1	EnsemblPlants:Bra012269.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008171	GO:GO:0016740	GO:GO:0032259	GO:GO:0046983	InterPro:IPR016461
InterPro:IPR036388	UniProt:M4D709	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100
PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF118	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases
SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI0001B63E16	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

AT1G21100 (E=4e-183) | O-methyltransferase, putative

Coordinates

chrA07:+:8947614..8948905

Molecular Weight (calculated)

40334.6 Da

IEP (calculated)

4.733

GRAVY (calculated)

0.116

Length

369 amino acids

Sequence
(BLAST)

001: MGILFEETLS SNPTIQIATD DDNELGLMAV RIANAAAFPM VLKAALELGV FDTLYAASVF LSPSEIATRL PTAPRNPEAP ALLDRMLRLL ASYSMVKCGT
101: DQAGKGERVY RAEPICRFFL KDNIQDIGSL ASQVIVNFHS VFLNTWAQLK DVVLEGGDAF GRAHGGMKLF DYMGTDERFS KLFNQTGFTI AVVKKALEVY
201: QGFNGVNVLV DVGGGVGNTL GVVTSKYPNI KGINFDLTCA LAQAPSYPGV EHVAGDMFVD VPTGDAMILK RILHDWTDED CVKILKNCWK SLPENGKVVV
301: IELVTPDSAE SGDINSNIAF DMDMLMFTQC SGGKERSRAE FEALAAESCF THCKFVCQAY HCWVIEFCK

Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)

001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK

Arabidopsis Description

IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.