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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G21100.1 Thale cress cytosol 95.98 95.98
AT1G21110.1 Thale cress cytosol 94.91 94.91
Bra012269.1-P Field mustard cytosol 90.62 91.6
CDY00362 Canola cytosol 90.62 91.6
CDY01334 Canola cytosol 90.62 91.6
AT1G21120.2 Thale cress cytosol 96.51 85.51
AT1G76790.1 Thale cress cytosol 71.05 72.21
AT1G62900.1 Thale cress cytosol 31.37 57.07
AT5G53810.1 Thale cress cytosol 57.1 56.35
AT1G77530.1 Thale cress cytosol 56.57 55.38
AT1G77520.1 Thale cress cytosol 56.3 55.12
AT5G37170.1 Thale cress cytosol 45.04 50.3
AT1G63140.4 Thale cress cytosol 53.35 49.63
AT5G54160.1 Thale cress cytosol 46.65 47.93
AT1G51990.1 Thale cress cytosol 38.07 39.12
AT1G33030.1 Thale cress cytosol 36.46 38.64
VIT_10s0003g04160.t01 Wine grape cytosol 37.0 38.55
AT3G53140.1 Thale cress cytosol 31.37 32.59
AT4G35150.1 Thale cress cytosol 25.74 29.54
AT4G35160.1 Thale cress cytosol 27.35 26.7
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1EntrezGene:838709ProteinID:AAF80648.1ProteinID:AEE30067.1
ProteinID:AEE30068.1EMBL:AK227119ArrayExpress:AT1G21130EnsemblPlantsGene:AT1G21130RefSeq:AT1G21130TAIR:AT1G21130
RefSeq:AT1G21130-TAIR-GEnsemblPlants:AT1G21130.1TAIR:AT1G21130.1EMBL:AY084260Unigene:At.43828EMBL:BT030091
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150GO:GO:0008152
GO:GO:0008168GO:GO:0008171GO:GO:0008757GO:GO:0009058GO:GO:0009987GO:GO:0016740
GO:GO:0019438GO:GO:0032259GO:GO:0046983InterPro:IPR016461InterPro:IPR036388RefSeq:NP_173537.1
RefSeq:NP_849693.1InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009025PO:PO:0009029
PO:PO:0009046PO:PO:0009047PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118InterPro:Plant_MeTrfase_dimerisationUniProt:Q9LPU8
InterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI000004829DInterPro:WH-like_DNA-bd_sfInterPro:WH_DNA-bd_sf
SEG:seg:::::
Description
IGMT4Indole glucosinolate O-methyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU8]
Coordinates
chr1:-:7398814..7400736
Molecular Weight (calculated)
40750.1 Da
IEP (calculated)
4.769
GRAVY (calculated)
0.083
Length
373 amino acids
Sequence
(BLAST)
001: MGYLLEETLS SNSKTPIVID DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAEASR SDSFLSPSEI ASKLPTTPRN PEAPVLLDRM LRLLASYSVV
101: KCGKVSEGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYQGFKGV NVLVDVGGGV GNTLGVVASK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPESG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.