Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003707.1-P | Field mustard | cytosol | 79.56 | 81.56 |
| CDX85972 | Canola | cytosol | 81.74 | 81.08 |
| CDX88317 | Canola | cytosol | 80.93 | 80.27 |
| Bra015719.1-P | Field mustard | cytosol | 80.65 | 80.0 |
| CDX87567 | Canola | cytosol | 80.65 | 80.0 |
| CDX68085 | Canola | cytosol | 70.3 | 78.9 |
| AT1G21100.1 | Thale cress | cytosol | 72.75 | 71.58 |
| AT1G21130.1 | Thale cress | cytosol | 72.21 | 71.05 |
| AT1G21110.1 | Thale cress | cytosol | 71.12 | 69.97 |
| AT1G21120.2 | Thale cress | cytosol | 71.93 | 62.71 |
| AT1G62900.1 | Thale cress | cytosol | 32.15 | 57.56 |
| AT1G77520.1 | Thale cress | cytosol | 55.04 | 53.02 |
| AT5G53810.1 | Thale cress | cytosol | 54.5 | 52.91 |
| AT1G77530.1 | Thale cress | cytosol | 54.5 | 52.49 |
| AT1G63140.4 | Thale cress | cytosol | 50.95 | 46.63 |
| AT5G37170.1 | Thale cress | cytosol | 41.69 | 45.81 |
| AT5G54160.1 | Thale cress | cytosol | 42.78 | 43.25 |
| VIT_10s0003g04160.t01 | Wine grape | cytosol | 38.15 | 39.11 |
| AT1G51990.1 | Thale cress | cytosol | 37.6 | 38.02 |
| AT1G33030.1 | Thale cress | cytosol | 35.15 | 36.65 |
| AT3G53140.1 | Thale cress | cytosol | 31.61 | 32.31 |
| AT4G35150.1 | Thale cress | cytosol | 24.8 | 28.0 |
| AT4G35160.1 | Thale cress | cytosol | 26.98 | 25.92 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | EntrezGene:844013 | UniProt:A0A178WFJ3 | ProteinID:AAF04440.1 |
| ProteinID:AEE35889.1 | ArrayExpress:AT1G76790 | EnsemblPlantsGene:AT1G76790 | RefSeq:AT1G76790 | TAIR:AT1G76790 | RefSeq:AT1G76790-TAIR-G |
| EnsemblPlants:AT1G76790.1 | TAIR:AT1G76790.1 | EMBL:AY088666 | Unigene:At.28236 | EMBL:BT002952 | EMBL:BT004388 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008171 | GO:GO:0008757 | GO:GO:0009058 | GO:GO:0009759 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0019748 | GO:GO:0032259 | GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 |
| RefSeq:NP_177805.1 | InterPro:O-MeTrfase_COMT | ProteinID:OAP17169.1 | InterPro:O_MeTrfase_2 | PFAM:PF00891 | PFAM:PF08100 |
| PIRSF:PIRSF005739 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51683 | PANTHER:PTHR11746 |
| PANTHER:PTHR11746:SF118 | InterPro:Plant_MeTrfase_dimerisation | UniProt:Q9SRD4 | InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 |
| UniParc:UPI000000BE59 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : |
Description
IGMT5Indole glucosinolate O-methyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRD4]
Coordinates
chr1:-:28822186..28823727
Molecular Weight (calculated)
40224.6 Da
IEP (calculated)
4.758
GRAVY (calculated)
0.103
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHLIPQTGD EETELGLAAV RLANCAAFPM VFKAAIELGV IDTLYLAARD DVTGSSSFLT PSEIAIRLPT KPSNPEAPAL LDRILRLLAS YSMVKCQIID
101: GNRVYKAEPI CRYFLKDNVD EELGTLASQL IVTLDTVFLN TWGELKNVVL EGGVAFGRAN GGLKLFDYIS KDERLSKLFN RTGFSVAVLK KILQVYSGFE
201: GVNVLVDVGG GVGDTLGFVT SKYPNIKGIN FDLTCALTQA PSYPNVEHVA GDMFVDVPKG DAILLKRILH DWTDEDCEKI LKNCWKALPE NGKVIVMEVV
301: TPDEADNRDV ISNIAFDMDL LMLTQLSGGK ERSRAEYVAM AANSGFPRCN FVCSAYHLWV IELTKQA
101: GNRVYKAEPI CRYFLKDNVD EELGTLASQL IVTLDTVFLN TWGELKNVVL EGGVAFGRAN GGLKLFDYIS KDERLSKLFN RTGFSVAVLK KILQVYSGFE
201: GVNVLVDVGG GVGDTLGFVT SKYPNIKGIN FDLTCALTQA PSYPNVEHVA GDMFVDVPKG DAILLKRILH DWTDEDCEKI LKNCWKALPE NGKVIVMEVV
301: TPDEADNRDV ISNIAFDMDL LMLTQLSGGK ERSRAEYVAM AANSGFPRCN FVCSAYHLWV IELTKQA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.