Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G21130.1 | Thale cress | cytosol | 95.98 | 95.98 |
| AT1G21110.1 | Thale cress | cytosol | 94.91 | 94.91 |
| CDY01335 | Canola | cytosol | 92.76 | 93.77 |
| Bra012268.1-P | Field mustard | cytosol | 92.23 | 93.22 |
| CDY01333 | Canola | cytosol | 91.42 | 90.93 |
| Bra012270.1-P | Field mustard | cytosol | 91.42 | 90.69 |
| CDY49745 | Canola | cytosol | 83.11 | 89.34 |
| CDY00364 | Canola | cytosol | 82.57 | 89.28 |
| AT1G21120.2 | Thale cress | cytosol | 96.51 | 85.51 |
| CDY00361 | Canola | cytosol | 83.91 | 79.04 |
| AT1G76790.1 | Thale cress | cytosol | 71.58 | 72.75 |
| AT1G62900.1 | Thale cress | cytosol | 31.37 | 57.07 |
| AT5G53810.1 | Thale cress | cytosol | 57.37 | 56.61 |
| AT1G77530.1 | Thale cress | cytosol | 56.84 | 55.64 |
| AT1G77520.1 | Thale cress | cytosol | 56.84 | 55.64 |
| AT5G37170.1 | Thale cress | cytosol | 44.77 | 50.0 |
| AT1G63140.4 | Thale cress | cytosol | 53.08 | 49.38 |
| AT5G54160.1 | Thale cress | cytosol | 46.38 | 47.66 |
| VIT_10s0003g04160.t01 | Wine grape | cytosol | 37.8 | 39.39 |
| AT1G51990.1 | Thale cress | cytosol | 37.8 | 38.84 |
| AT1G33030.1 | Thale cress | cytosol | 36.19 | 38.35 |
| AT3G53140.1 | Thale cress | cytosol | 31.1 | 32.31 |
| AT4G35150.1 | Thale cress | cytosol | 25.47 | 29.23 |
| AT4G35160.1 | Thale cress | cytosol | 27.61 | 26.96 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | EntrezGene:838706 | ProteinID:AAF80651.1 | ProteinID:AEE30064.1 |
| EMBL:AF344316 | ArrayExpress:AT1G21100 | EnsemblPlantsGene:AT1G21100 | RefSeq:AT1G21100 | TAIR:AT1G21100 | RefSeq:AT1G21100-TAIR-G |
| EnsemblPlants:AT1G21100.1 | TAIR:AT1G21100.1 | EMBL:AY057529 | EMBL:AY143974 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 |
| GO:GO:0008757 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019438 | GO:GO:0019748 |
| GO:GO:0032259 | GO:GO:0042343 | GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 | RefSeq:NP_173534.1 |
| InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 | PFAM:PF08100 | PIRSF:PIRSF005739 | PO:PO:0000293 |
| PO:PO:0007115 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 |
| PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF118 | InterPro:Plant_MeTrfase_dimerisation | UniProt:Q9LPU5 | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF46785 | SUPFAM:SSF53335 | UniParc:UPI000004829B | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
Coordinates
chr1:-:7386762..7388512
Molecular Weight (calculated)
40871.4 Da
IEP (calculated)
5.008
GRAVY (calculated)
0.083
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.