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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY00364 Canola cytosol 97.12 97.68
CDY01333 Canola cytosol 96.83 89.6
CDX96602 Canola cytosol 91.07 84.49
CDY33669 Canola cytosol 90.2 83.69
CDY04598 Canola cytosol 89.91 83.65
CDY29475 Canola cytosol 89.91 83.65
CDY01335 Canola cytosol 88.47 83.2
AT1G21100.1 Thale cress cytosol 89.34 83.11
CDY04600 Canola cytosol 88.18 81.6
CDY29477 Canola cytosol 67.44 81.53
CDY04597 Canola cytosol 87.03 81.18
CDY00362 Canola cytosol 85.59 80.49
CDY01334 Canola cytosol 85.3 80.22
CDY33668 Canola cytosol 85.59 79.84
CDX96604 Canola cytosol 58.79 76.69
CDY00361 Canola cytosol 79.25 69.44
CDX68085 Canola cytosol 63.69 67.58
CDX85972 Canola cytosol 67.44 63.24
CDX88317 Canola cytosol 66.57 62.43
CDX87567 Canola cytosol 66.28 62.16
CDX68056 Canola cytosol 54.47 49.61
CDX68776 Canola cytosol 41.5 48.65
CDX79208 Canola cytosol 53.31 48.56
CDY54913 Canola cytosol 51.59 46.98
CDY38336 Canola cytosol 50.72 46.93
CDY44537 Canola cytosol 50.72 46.93
CDY45380 Canola cytosol 50.43 46.3
CDY23305 Canola cytosol 48.41 46.28
CDX68055 Canola extracellular 44.67 45.86
CDY49883 Canola cytosol 49.86 45.77
CDY59571 Canola cytosol 49.86 45.41
CDY38339 Canola cytosol 49.86 45.41
CDX94511 Canola cytosol 49.57 45.14
CDY63947 Canola cytosol 49.57 45.14
CDX68054 Canola cytosol 48.99 44.97
CDX79210 Canola cytosol 48.41 44.44
CDX75190 Canola cytosol 44.67 44.41
CDY42934 Canola cytosol 49.28 43.73
CDY01900 Canola cytosol 48.13 43.38
CDX88377 Canola cytosol 45.53 41.8
CDX87513 Canola cytosol 42.94 41.27
CDY29856 Canola cytosol 40.92 38.69
CDX92835 Canola cytosol 40.63 38.42
CDY14330 Canola cytosol 39.77 38.12
CDY18304 Canola cytosol 22.19 37.38
CDY18302 Canola cytosol 22.19 37.38
CDY55338 Canola cytosol 31.41 36.82
CDY43839 Canola cytosol 38.62 36.81
CDY18306 Canola cytosol 38.33 36.54
CDY14328 Canola cytosol 38.33 36.54
CDY43052 Canola cytosol 38.33 36.54
CDY19037 Canola cytosol 37.75 35.5
CDY28789 Canola cytosol 36.89 35.46
VIT_10s0003g04160.t01 Wine grape cytosol 36.02 34.92
CDX84055 Canola cytosol 35.73 34.83
CDY19039 Canola cytosol 34.87 34.38
CDY44972 Canola cytosol 35.16 33.8
CDY54813 Canola cytosol 33.72 32.14
CDY52173 Canola cytosol 33.43 31.69
CDY64795 Canola cytosol 32.28 30.6
CDY41780 Canola cytosol 22.48 30.47
CDY70033 Canola cytosol 20.17 30.43
CDY64794 Canola cytosol 17.87 30.1
CDX95399 Canola cytosol 28.53 27.58
CDX84061 Canola cytosol 19.6 25.56
CDX76223 Canola cytosol 19.31 25.0
CDX76316 Canola cytosol 23.05 24.24
CDY09084 Canola cytosol 23.63 24.12
CDX72521 Canola cytosol 22.19 23.55
CDY17514 Canola cytosol 23.63 23.5
CDX72522 Canola cytosol 21.33 23.12
CDY17512 Canola cytosol 23.05 22.54
CDY09082 Canola cytosol 12.68 22.22
CDY67664 Canola cytosol 20.17 21.88
CDY52172 Canola cytosol 32.85 21.63
CDY51573 Canola cytosol 24.5 21.63
CDY67665 Canola cytosol 16.71 20.71
Protein Annotations
Gene3D:1.10.10.10Gene3D:3.40.50.150MapMan:50.2.1GO:A0A078IFQ7UniProt:A0A078IFQ7EnsemblPlants:CDY49745
ProteinID:CDY49745ProteinID:CDY49745.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008171GO:GO:0016740GO:GO:0032259
GO:GO:0046983EnsemblPlantsGene:GSBRNA2T00093742001InterPro:IPR016461InterPro:IPR036388InterPro:O-MeTrfase_COMTInterPro:O_MeTrfase_2
PFAM:PF00891PFAM:PF08100PIRSF:PIRSF005739PFscan:PS51683PANTHER:PTHR11746PANTHER:PTHR11746:SF118
InterPro:Plant_MeTrfase_dimerisationInterPro:SAM-dependent_MTasesSUPFAM:SSF46785SUPFAM:SSF53335UniParc:UPI0004EE7C46InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sfSEG:seg::::
Description
BnaA02g19270DBnaA02g19270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFQ7]
Coordinates
chrLK032856:+:61128..62437
Molecular Weight (calculated)
38495.2 Da
IEP (calculated)
4.712
GRAVY (calculated)
0.010
Length
347 amino acids
Sequence
(BLAST)
001: MGFPFEETLS SNPKIQTVID DDNELGLMAV RLSNAAAFPM VLKASLELGV FDTLYADAAR TDSFLSPSDI ASRLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCSKVSSVKG ERVYRAEPIC RFFLKDNIQD IGSLASQVII NFDSVFFNTW VQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKNA
201: LDYPHIKGIN FDLTCALAQA PSYPGVEHVP GDMFVDVPTG DTMILKRILH DWTDDCVNIL KNCWKSLPNN GKIVVIELVT PDDAENGDIN ANIAFDMDML
301: MFTQCSGGKE RSRAEFKALA AAAGFNQCKF VCQAYHCWII EFCKEDV
Best Arabidopsis Sequence Match ( AT1G21100.1 )
(BLAST)
001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
Arabidopsis Description
IGMT1Indole glucosinolate O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.