Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76316 | Canola | cytosol | 92.55 | 97.88 |
| CDX72522 | Canola | cytosol | 81.95 | 89.38 |
| CDY67664 | Canola | cytosol | 81.09 | 88.44 |
| AT4G35150.1 | Thale cress | cytosol | 79.94 | 85.85 |
| CDX72521 | Canola | cytosol | 80.23 | 85.63 |
| Bra034678.1-P | Field mustard | cytosol | 63.04 | 78.29 |
| CDY17512 | Canola | cytosol | 79.08 | 77.75 |
| CDY09084 | Canola | cytosol | 75.07 | 77.06 |
| AT4G35160.1 | Thale cress | cytosol | 81.95 | 74.87 |
| CDY67665 | Canola | cytosol | 57.59 | 71.79 |
| CDY51573 | Canola | cytosol | 75.64 | 67.18 |
| CDY09082 | Canola | cytosol | 37.25 | 65.66 |
| VIT_03s0038g03090.t01 | Wine grape | cytosol | 50.43 | 49.86 |
| VIT_03s0038g03080.t01 | Wine grape | cytosol | 49.86 | 47.54 |
| PGSC0003DMT400000736 | Potato | cytosol | 34.1 | 47.04 |
| KRH31595 | Soybean | cytoskeleton, cytosol, endoplasmic reticulum | 47.85 | 45.63 |
| Solyc01g111900.2.1 | Tomato | cytosol | 44.99 | 43.98 |
| PGSC0003DMT400047988 | Potato | cytosol | 44.41 | 43.42 |
| Solyc12g009110.1.1 | Tomato | cytosol | 45.85 | 43.36 |
| PGSC0003DMT400047989 | Potato | cytosol | 40.4 | 41.84 |
| PGSC0003DMT400095923 | Potato | cytosol | 46.42 | 41.12 |
| CDY18304 | Canola | cytosol | 22.35 | 37.86 |
| CDY18302 | Canola | cytosol | 22.35 | 37.86 |
| CDY19039 | Canola | cytosol | 30.95 | 30.68 |
| CDY19037 | Canola | cytosol | 32.38 | 30.62 |
| CDY29477 | Canola | cytosol | 24.64 | 29.97 |
| CDY55338 | Canola | cytosol | 24.93 | 29.39 |
| CDX68776 | Canola | cytosol | 24.93 | 29.39 |
| CDX68055 | Canola | extracellular | 28.08 | 28.99 |
| CDY14330 | Canola | cytosol | 29.8 | 28.73 |
| CDY14328 | Canola | cytosol | 29.51 | 28.3 |
| CDY70033 | Canola | cytosol | 18.62 | 28.26 |
| CDY29856 | Canola | cytosol | 29.51 | 28.07 |
| CDY18306 | Canola | cytosol | 29.23 | 28.02 |
| CDY43052 | Canola | cytosol | 29.23 | 28.02 |
| CDY43839 | Canola | cytosol | 29.23 | 28.02 |
| CDY54813 | Canola | cytosol | 29.23 | 28.02 |
| CDX68056 | Canola | cytosol | 30.37 | 27.82 |
| CDY45380 | Canola | cytosol | 30.09 | 27.78 |
| CDX84055 | Canola | cytosol | 28.08 | 27.53 |
| CDX92835 | Canola | cytosol | 28.94 | 27.52 |
| CDY49883 | Canola | cytosol | 29.8 | 27.51 |
| CDY44972 | Canola | cytosol | 28.37 | 27.42 |
| CDX75190 | Canola | cytosol | 27.22 | 27.22 |
| CDY38336 | Canola | cytosol | 29.23 | 27.2 |
| CDY29475 | Canola | cytosol | 28.94 | 27.08 |
| CDY59571 | Canola | cytosol | 29.51 | 27.03 |
| CDY04598 | Canola | cytosol | 28.65 | 26.81 |
| CDY38339 | Canola | cytosol | 29.23 | 26.77 |
| CDY44537 | Canola | cytosol | 28.65 | 26.67 |
| CDX79208 | Canola | cytosol | 28.94 | 26.51 |
| CDY52173 | Canola | cytosol | 27.79 | 26.5 |
| CDY33668 | Canola | cytosol | 28.08 | 26.34 |
| CDY00362 | Canola | cytosol | 27.79 | 26.29 |
| CDY01334 | Canola | cytosol | 27.79 | 26.29 |
| CDX94511 | Canola | cytosol | 28.65 | 26.25 |
| CDY54913 | Canola | cytosol | 28.65 | 26.25 |
| CDX96602 | Canola | cytosol | 28.08 | 26.2 |
| CDY23305 | Canola | cytosol | 27.22 | 26.17 |
| CDY04597 | Canola | cytosol | 27.79 | 26.08 |
| CDY01335 | Canola | cytosol | 27.51 | 26.02 |
| CDY63947 | Canola | cytosol | 28.37 | 25.98 |
| CDX96604 | Canola | cytosol | 19.77 | 25.94 |
| CDY28789 | Canola | cytosol | 26.65 | 25.76 |
| CDX87513 | Canola | cytosol | 26.65 | 25.76 |
| CDY04600 | Canola | cytosol | 27.51 | 25.6 |
| CDY33669 | Canola | cytosol | 27.22 | 25.4 |
| CDY64795 | Canola | cytosol | 26.36 | 25.14 |
| CDX95399 | Canola | cytosol | 25.79 | 25.07 |
| CDX68054 | Canola | cytosol | 26.93 | 24.87 |
| CDX88377 | Canola | cytosol | 26.93 | 24.87 |
| CDX87567 | Canola | cytosol | 26.36 | 24.86 |
| CDX88317 | Canola | cytosol | 26.36 | 24.86 |
| CDY01333 | Canola | cytosol | 26.65 | 24.8 |
| CDX79210 | Canola | cytosol | 26.65 | 24.6 |
| CDY42934 | Canola | cytosol | 27.51 | 24.55 |
| CDX85972 | Canola | cytosol | 25.79 | 24.32 |
| CDY00361 | Canola | cytosol | 27.51 | 24.24 |
| CDY01900 | Canola | cytosol | 26.36 | 23.9 |
| CDY49745 | Canola | cytosol | 23.5 | 23.63 |
| CDY00364 | Canola | cytosol | 22.92 | 23.19 |
| CDX68085 | Canola | cytosol | 21.49 | 22.94 |
| CDX76223 | Canola | cytosol | 17.48 | 22.76 |
| CDX84061 | Canola | cytosol | 15.76 | 20.68 |
| CDY41780 | Canola | cytosol | 13.75 | 18.75 |
| CDY52172 | Canola | cytosol | 27.51 | 18.22 |
| CDY64794 | Canola | cytosol | 10.6 | 17.96 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:A0A078FWP1 | UniProt:A0A078FWP1 | EnsemblPlants:CDY17514 |
| ProteinID:CDY17514 | ProteinID:CDY17514.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 | GO:GO:0032259 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00095712001 | InterPro:IPR016461 | InterPro:IPR036388 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 |
| PFAM:PF00891 | PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF98 |
| InterPro:Plant_MeTrfase_dimerisation | InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | UniParc:UPI0004EECAAD | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaC03g65490DBnaC03g65490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWP1]
Coordinates
chrLK032074:-:517961..523080
Molecular Weight (calculated)
39076.2 Da
IEP (calculated)
4.791
GRAVY (calculated)
-0.111
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MEECKRNLVD EEAKASVDIW RYVFGFADIA AAKCAIDLKI PEAIENHPSS QPMTLAELSS TVSASPSHLR RIMRFLVHQG IFKEVPIKDG LTTGYTNTPL
101: SRRMMITKRD GKSLAPFDLW ALAEDNPCFS EMINEAMACD TRRVVPRVAR ACDDLFDGVA TVVDVGGGNG EAVGILVKEF PWIKGFNFDL PHVIEVAQVL
201: DGVENVGGDM FDSIPKCDAV FIKWVLHDWG DKDCIKILKN CKEAVPANIG KVVIVESVIR ENKKTMIVEE RDEKLEHVRL MLDMVMMAHT STGKERTLKE
301: WDFVLNEAGF ARYEVRDIDD VQCVIIAYLS SMEHGPEPTI EDMRGLNPS
101: SRRMMITKRD GKSLAPFDLW ALAEDNPCFS EMINEAMACD TRRVVPRVAR ACDDLFDGVA TVVDVGGGNG EAVGILVKEF PWIKGFNFDL PHVIEVAQVL
201: DGVENVGGDM FDSIPKCDAV FIKWVLHDWG DKDCIKILKN CKEAVPANIG KVVIVESVIR ENKKTMIVEE RDEKLEHVRL MLDMVMMAHT STGKERTLKE
301: WDFVLNEAGF ARYEVRDIDD VQCVIIAYLS SMEHGPEPTI EDMRGLNPS
001: MEESKRNLLD EEAKASLDIW RYVFGFADIA AAKCAIDLKI PEAIENHPSS QPVTLSELSS AVSASPSHLR RIMRFLVHQG LFKEVPTKDG LATGYTNTPL
101: SRRMMITKLH GKDLWAFAQD NLCHSQLINE AMACDARRVV PRVAGACQGL FDGVATVVDV GGGTGETMGI LVKEFPWIKG FNFDLPHVIE VAQVLDGVEN
201: VEGDMFDSIP ASDAVIIKWV LHDWGDKDCI KILKNCKEAV LPNIGKVLIV ECVIGEKKNT MIAEERDDKL EHVRLQLDMV MMVHTSTGKE RTLKEWDFVL
301: TEAGFARYEV RDFDDVQSLI IAYRS
101: SRRMMITKLH GKDLWAFAQD NLCHSQLINE AMACDARRVV PRVAGACQGL FDGVATVVDV GGGTGETMGI LVKEFPWIKG FNFDLPHVIE VAQVLDGVEN
201: VEGDMFDSIP ASDAVIIKWV LHDWGDKDCI KILKNCKEAV LPNIGKVLIV ECVIGEKKNT MIAEERDDKL EHVRLQLDMV MMVHTSTGKE RTLKEWDFVL
301: TEAGFARYEV RDFDDVQSLI IAYRS
Arabidopsis Description
O-methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9T002]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.