Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040689.1-P | Field mustard | cytosol | 98.13 | 73.26 |
| CDX95399 | Canola | cytosol | 97.76 | 72.98 |
| AT3G53140.1 | Thale cress | cytosol | 88.43 | 66.02 |
| CDY70033 | Canola | cytosol | 50.37 | 58.7 |
| KRH21852 | Soybean | cytosol, nucleus | 70.15 | 52.96 |
| VIT_08s0007g04520.t01 | Wine grape | cytosol | 70.15 | 52.51 |
| KRH13467 | Soybean | cytosol | 69.03 | 51.97 |
| PGSC0003DMT400022143 | Potato | cytosol | 66.79 | 49.58 |
| Solyc10g085830.1.1 | Tomato | plastid | 64.18 | 47.65 |
| HORVU6Hr1G092840.2 | Barley | cytosol | 49.63 | 45.24 |
| Os02t0823400-01 | Rice | cytosol | 56.34 | 41.37 |
| TraesCS6A01G405200.1 | Wheat | cytosol | 55.22 | 40.77 |
| TraesCS6D01G388700.1 | Wheat | cytosol | 55.6 | 40.27 |
| TraesCS6B01G449400.1 | Wheat | cytosol | 55.6 | 40.27 |
| EES06050 | Sorghum | cytosol, plastid | 55.6 | 39.52 |
| Zm00001d051870_P001 | Maize | cytosol | 54.48 | 39.04 |
| CDY55338 | Canola | cytosol | 33.21 | 30.07 |
| CDY41780 | Canola | cytosol | 27.24 | 28.52 |
| CDY18306 | Canola | cytosol | 36.94 | 27.2 |
| CDY43839 | Canola | cytosol | 36.94 | 27.2 |
| CDY14328 | Canola | cytosol | 36.94 | 27.2 |
| CDY64794 | Canola | cytosol | 20.9 | 27.18 |
| CDY14330 | Canola | cytosol | 36.57 | 27.07 |
| CDY43052 | Canola | cytosol | 36.57 | 26.92 |
| CDY18302 | Canola | cytosol | 20.15 | 26.21 |
| CDY18304 | Canola | cytosol | 20.15 | 26.21 |
| CDX92835 | Canola | cytosol | 35.07 | 25.61 |
| GSMUA_Achr11P... | Banana | cytosol | 13.81 | 25.17 |
| CDY29856 | Canola | cytosol | 34.33 | 25.07 |
| CDY67665 | Canola | cytosol | 26.12 | 25.0 |
| CDY19037 | Canola | cytosol | 33.58 | 24.39 |
| CDY28789 | Canola | cytosol | 32.46 | 24.1 |
| CDX84061 | Canola | cytosol | 23.88 | 24.06 |
| CDY19039 | Canola | cytosol | 31.34 | 23.86 |
| CDX68056 | Canola | cytosol | 33.58 | 23.62 |
| CDY44972 | Canola | cytosol | 31.72 | 23.55 |
| CDX79208 | Canola | cytosol | 33.21 | 23.36 |
| CDX84055 | Canola | cytosol | 30.97 | 23.31 |
| CDY49883 | Canola | cytosol | 32.46 | 23.02 |
| CDX88377 | Canola | cytosol | 32.46 | 23.02 |
| CDY45380 | Canola | cytosol | 32.46 | 23.02 |
| CDX87513 | Canola | cytosol | 30.97 | 22.99 |
| CDX68776 | Canola | cytosol | 25.37 | 22.97 |
| CDY38336 | Canola | cytosol | 32.09 | 22.93 |
| CDY63947 | Canola | cytosol | 32.46 | 22.83 |
| CDY38339 | Canola | cytosol | 32.09 | 22.57 |
| CDY04598 | Canola | cytosol | 31.34 | 22.52 |
| CDY29475 | Canola | cytosol | 31.34 | 22.52 |
| CDY44537 | Canola | cytosol | 31.34 | 22.4 |
| CDY59571 | Canola | cytosol | 31.72 | 22.31 |
| CDY01335 | Canola | cytosol | 30.6 | 22.22 |
| CDX96602 | Canola | cytosol | 30.97 | 22.19 |
| CDX68055 | Canola | extracellular | 27.99 | 22.19 |
| CDX96604 | Canola | cytosol | 22.01 | 22.18 |
| CDX85972 | Canola | cytosol | 30.6 | 22.16 |
| CDY04600 | Canola | cytosol | 30.97 | 22.13 |
| CDY54913 | Canola | cytosol | 31.34 | 22.05 |
| CDY04597 | Canola | cytosol | 30.6 | 22.04 |
| CDY23305 | Canola | cytosol | 29.85 | 22.04 |
| CDY54813 | Canola | cytosol | 29.85 | 21.98 |
| CDY01334 | Canola | cytosol | 30.22 | 21.95 |
| CDX87567 | Canola | cytosol | 30.22 | 21.89 |
| CDX88317 | Canola | cytosol | 30.22 | 21.89 |
| CDY01333 | Canola | cytosol | 30.6 | 21.87 |
| CDY33668 | Canola | cytosol | 30.22 | 21.77 |
| CDX68054 | Canola | cytosol | 30.6 | 21.69 |
| CDY00362 | Canola | cytosol | 29.85 | 21.68 |
| CDY33669 | Canola | cytosol | 30.22 | 21.66 |
| CDY52173 | Canola | cytosol | 29.48 | 21.58 |
| CDY64795 | Canola | cytosol | 29.48 | 21.58 |
| CDY29477 | Canola | cytosol | 22.76 | 21.25 |
| CDY09082 | Canola | cytosol | 15.67 | 21.21 |
| CDX75190 | Canola | cytosol | 27.61 | 21.2 |
| CDX79210 | Canola | cytosol | 29.85 | 21.16 |
| CDX94511 | Canola | cytosol | 29.85 | 21.0 |
| CDY42934 | Canola | cytosol | 30.22 | 20.72 |
| CDY01900 | Canola | cytosol | 29.48 | 20.52 |
| CDY00361 | Canola | cytosol | 29.85 | 20.2 |
| CDY17512 | Canola | cytosol | 25.75 | 19.44 |
| CDY00364 | Canola | cytosol | 25.0 | 19.42 |
| CDY49745 | Canola | cytosol | 25.0 | 19.31 |
| CDX72521 | Canola | cytosol | 23.51 | 19.27 |
| CDX68085 | Canola | cytosol | 23.51 | 19.27 |
| CDY09084 | Canola | cytosol | 23.51 | 18.53 |
| CDX72522 | Canola | cytosol | 22.01 | 18.44 |
| HORVU6Hr1G092780.2 | Barley | cytosol | 9.33 | 18.38 |
| CDY51573 | Canola | cytosol | 26.87 | 18.32 |
| CDX76316 | Canola | cytosol | 22.39 | 18.18 |
| CDY17514 | Canola | cytosol | 22.76 | 17.48 |
| CDY67664 | Canola | cytosol | 20.52 | 17.19 |
| CDY52172 | Canola | cytosol | 30.22 | 15.37 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:A0A078CMD3 | EnsemblPlants:CDX76223 | ProteinID:CDX76223 |
| ProteinID:CDX76223.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00126544001 |
| InterPro:IPR016461 | InterPro:IPR036388 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 | PFAM:PF08100 |
| PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF90 | InterPro:Plant_MeTrfase_dimerisation | InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 |
| SUPFAM:SSF53335 | UniParc:UPI0004EE3BF9 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : |
Description
BnaA04g04870D
Coordinates
chrLK031806:-:1937516..1938835
Molecular Weight (calculated)
29114.1 Da
IEP (calculated)
5.587
GRAVY (calculated)
-0.074
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MENGSSESRN KARLAIMELA NMISVPMSLN AAVRLGLADA IWNDGDNSPL SATEILPRLH LTYQNGTIGG DPENLQRILR MLTSYGVFSE HLTNAGRKYS
101: ITDVGKTLVT DSDGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKCEEMNGLM QKAMSGVSVP FMKAILDGYD GFKYVEHLVD
201: VGGSAGDCLR MIIKQFPNVR QGINFDLPEV VAKAPKIPGV THMGGDMFQS VPSGDAIFMK VCGNIVVT
101: ITDVGKTLVT DSDGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKCEEMNGLM QKAMSGVSVP FMKAILDGYD GFKYVEHLVD
201: VGGSAGDCLR MIIKQFPNVR QGINFDLPEV VAKAPKIPGV THMGGDMFQS VPSGDAIFMK VCGNIVVT
001: MENESSESRN RARLAIMELA NMISVPMSLN AAVRLGIADA IWNGGANSPL SAAEILPRLH LPSHTTIGGD PENLQRILRM LTSYGVFSEH LVGSIERKYS
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK
Arabidopsis Description
AT3g53140/T4D2_70 [Source:UniProtKB/TrEMBL;Acc:Q9SCP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.