CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051870_P001	Maize	cytosol	90.19	90.91
TraesCS6A01G405200.1	Wheat	cytosol	81.17	84.3
HORVU6Hr1G092780.2	Barley	cytosol	30.24	83.82
TraesCS6D01G388700.1	Wheat	cytosol	82.23	83.78
Os02t0823400-01	Rice	cytosol	80.9	83.56
TraesCS6B01G449400.1	Wheat	cytosol	81.7	83.24
GSMUA_Achr11P...	Banana	cytosol	29.44	75.51
HORVU6Hr1G092840.2	Barley	cytosol	56.5	72.45
CDY70033	Canola	cytosol	38.99	63.91
KRH21852	Soybean	cytosol, nucleus	59.68	63.38
KRH13467	Soybean	cytosol	59.15	62.64
AT3G53140.1	Thale cress	cytosol	57.29	60.17
Bra040689.1-P	Field mustard	cytosol	56.5	59.33
VIT_08s0007g04520.t01	Wine grape	cytosol	56.23	59.22
CDX95399	Canola	cytosol	56.23	59.05
PGSC0003DMT400022143	Potato	cytosol	53.58	55.96
Solyc10g085830.1.1	Tomato	plastid	53.32	55.68
CDX76223	Canola	cytosol	39.52	55.6
EES14578	Sorghum	cytosol	35.81	37.29
OQU93005	Sorghum	cytosol	33.42	34.62
EES13432	Sorghum	cytosol, plastid, vacuole	31.83	32.09
KXG24559	Sorghum	cytosol	31.83	31.83
OQU79974	Sorghum	cytosol	30.24	30.89
KXG24554	Sorghum	cytosol	29.97	30.05

Protein Annotations

Gene3D:1.10.10.10	Gene3D:3.40.50.150	MapMan:7.9.6.1	EntrezGene:8059710	UniProt:C5XWK7	EnsemblPlants:EES06050
ProteinID:EES06050	ProteinID:EES06050.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008171	GO:GO:0008757	GO:GO:0008938	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0019438	GO:GO:0032259	GO:GO:1901847	InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT
InterPro:O_MeTrfase_2	PFAM:PF00891	PIRSF:PIRSF005739	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF90
InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3004G351400	SUPFAM:SSF46785	SUPFAM:SSF53335	unigene:Sbi.5385	UniParc:UPI0001A85CB3
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002453074.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:68006557..68010568

Molecular Weight (calculated)

40297.0 Da

IEP (calculated)

5.235

GRAVY (calculated)

-0.011

Length

377 amino acids

Sequence
(BLAST)

001: MPPPSAAATS TTAAASAARD DMSPAEARLA MMELANMVSV PMALTAVIRL GVPAAIWAGG ANAPRSAAEL LPAGHPDPSV LERLLRLLAS RGVFSESTST
101: SEDRTTTTRR FALTAVGRTL VPEGASGASY ADYVLQHHQD ALVAAWPRLH EAVLDPRGPE PFARANAGVP AYAYYGKDRE ANQVMLRAMT GVSEPFMHAL
201: LDGYGFDGGF HGVATLVDVG GSSGACLEMI MRRVPTIKEG INFDLPDVVA DAPAIAGVRH VGGDMFKSIP SGDAIFMKWV LTTWTNDECT AILRNCHAAL
301: PDGGKLVACE PVVPEETDSS TRTRALLEND IFVMTTYRTQ GRERSEEEFH HLGIAAGFTG FRAIYLDPFY AVLEYTK

Best Arabidopsis Sequence Match ( AT3G53140.1 )
(BLAST)

001: MENESSESRN RARLAIMELA NMISVPMSLN AAVRLGIADA IWNGGANSPL SAAEILPRLH LPSHTTIGGD PENLQRILRM LTSYGVFSEH LVGSIERKYS
101: LTDVGKTLVT DSGGLSYAAY VLQHHQEALM RAWPLVHTAV VEPETEPYVK ANGEAAYAQY GKSEEMNGLM QKAMSGVSVP FMKAILDGYD GFKSVDILVD
201: VGGSAGDCLR MILQQFPNVR EGINFDLPEV VAKAPNIPGV THVGGDMFQS VPSADAIFMK WVLTTWTDEE CKQIMKNCYN ALPVGGKLIA CEPVLPKETD
301: ESHRTRALLE GDIFVMTIYR TKGKHRTEEE FIELGLSAGF PTFRPFYIDY FYTILEFQK

Arabidopsis Description

AT3g53140/T4D2_70 [Source:UniProtKB/TrEMBL;Acc:Q9SCP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.