CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049541_P001	Maize	cytosol, extracellular, mitochondrion	90.88	90.38
Os08t0157500-01	Rice	cytosol, plasma membrane	81.77	80.43
TraesCS7D01G341500.1	Wheat	cytosol, golgi, unclear	79.01	79.44
TraesCS7B01G245500.1	Wheat	cytosol	79.01	79.44
TraesCS7A01G333900.1	Wheat	cytosol	79.01	79.44
TraesCS3B01G612000.1	Wheat	cytosol	77.9	79.21
HORVU7Hr1G082280.1	Barley	cytosol	78.73	79.17
TraesCS3D01G540200.1	Wheat	cytosol	77.07	78.37
TraesCS3A01G534900.1	Wheat	cytosol	76.8	78.09
TraesCS6D01G008200.1	Wheat	cytosol	74.86	76.77
TraesCS6A01G005600.1	Wheat	cytosol	73.76	75.64
TraesCS6B01G011100.1	Wheat	cytosol	74.59	75.0
TraesCS1D01G359500.1	Wheat	cytosol	47.24	73.08
HORVU3Hr1G116770.1	Barley	cytosol	75.69	67.99
KRH53638	Soybean	mitochondrion	62.43	61.92
CDY18304	Canola	cytosol	34.81	61.16
CDY18302	Canola	cytosol	34.81	61.16
AT5G54160.1	Thale cress	cytosol	61.33	61.16
KRH64288	Soybean	cytosol, nucleus	61.6	61.1
KRH53640	Soybean	cytosol	61.33	60.82
Solyc03g080180.2.1	Tomato	extracellular	59.67	60.5
KRH53639	Soybean	cytosol	61.05	60.38
PGSC0003DMT400001512	Potato	cytosol	59.94	59.78
CDY18306	Canola	cytosol	59.94	59.62
CDY43839	Canola	cytosol	59.67	59.34
Bra003007.1-P	Field mustard	cytosol	59.39	59.07
Bra029041.1-P	Field mustard	cytosol	59.39	59.07
CDY14328	Canola	cytosol	59.39	59.07
CDY43052	Canola	cytosol	59.39	59.07
KRH64289	Soybean	cytosol	53.87	58.56
CDY14330	Canola	cytosol	57.18	57.18
Bra003009.1-P	Field mustard	cytosol	54.7	56.57
Bra019031.1-P	Field mustard	cytosol	56.35	55.59
CDY55338	Canola	cytosol	45.3	55.41
Bra026320.1-P	Field mustard	cytosol	45.3	55.41
CDY29856	Canola	cytosol	55.8	55.04
CDY28789	Canola	cytosol	54.7	54.85
Bra022700.1-P	Field mustard	cytosol	54.7	54.85
CDX92835	Canola	cytosol	55.52	54.77
CDY19037	Canola	cytosol	54.97	53.93
CDY19039	Canola	cytosol	50.83	52.27
CDY41780	Canola	cytosol	35.91	50.78
OQU93005	Sorghum	cytosol	50.0	49.73
KRH14071	Soybean	cytosol	27.62	48.54
OQU79974	Sorghum	cytosol	46.96	46.07
EES13432	Sorghum	cytosol, plastid, vacuole	47.51	45.99
KXG24559	Sorghum	cytosol	47.79	45.89
KXG24554	Sorghum	cytosol	46.96	45.21
EES06050	Sorghum	cytosol, plastid	37.29	35.81
VIT_16s0098g00850.t01	Wine grape	cytosol	63.26	30.95

Protein Annotations

Gene3D:1.10.10.10	MapMan:21.6.1.7	Gene3D:3.40.50.150	PDB:4PGG	PDB:4PGH	EntrezGene:8069622
UniProt:C5YH12	InterPro:De-COase2_CS	EnsemblPlants:EES14578	ProteinID:EES14578	ProteinID:EES14578.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0008171	GO:GO:0008757	GO:GO:0009058	GO:GO:0009809	GO:GO:0009987	GO:GO:0016740
GO:GO:0017096	GO:GO:0019438	GO:GO:0019748	GO:GO:0030187	GO:GO:0030744	GO:GO:0032259
GO:GO:0046872	GO:GO:0046983	GO:GO:0047763	GO:GO:0051536	GO:GO:0051539	GO:GO:0051555
EMBL:HQ661801	InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891
PFAM:PF08100	PIRSF:PIRSF005739	ScanProsite:PS00879	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120
InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3007G047300	SUPFAM:SSF46785	SUPFAM:SSF53335	unigene:Sbi.6103
UniParc:UPI0001A87BE9	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002445083.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:4721073..4724503

Molecular Weight (calculated)

39592.7 Da

IEP (calculated)

5.564

GRAVY (calculated)

-0.015

Length

362 amino acids

Sequence
(BLAST)

001: MGSTAEDVAA VADEEACMYA MQLASSSILP MTLKNALELG LLEVLQKDAG KALAAEEVVA RLPVAPTNPA AADMVDRMLR LLASYDVVKC QMEDKDGKYE
101: RRYSAAPVGK WLTPNEDGVS MAALALMNQD KVLMESWYYL KDAVLDGGIP FNKAYGMTAF EYHGTDPRFN RVFNEGMKNH SVIITKKLLE FYTGFDESVS
201: TLVDVGGGIG ATLHAITSHH SHIRGVNFDL PHVISEAPPF PGVQHVGGDM FKSVPAGDAI LMKWILHDWS DAHCATLLKN CYDALPEKGG KVIVVECVLP
301: VTTDAVPKAQ GVFHVDMIML AHNPGGRERY EREFRDLAKA AGFSGFKATY IYANAWAIEF IK

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.