Factsheet for Zm00001d049541_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14578	Sorghum	cytosol	90.38	90.88
Os08t0157500-01	Rice	cytosol, plasma membrane	83.52	82.61
TraesCS7D01G341500.1	Wheat	cytosol, golgi, unclear	80.22	81.11
TraesCS7B01G245500.1	Wheat	cytosol	80.22	81.11
TraesCS7A01G333900.1	Wheat	cytosol	80.22	81.11
HORVU7Hr1G082280.1	Barley	cytosol	80.22	81.11
TraesCS3B01G612000.1	Wheat	cytosol	78.85	80.62
TraesCS3D01G540200.1	Wheat	cytosol	78.3	80.06
TraesCS3A01G534900.1	Wheat	cytosol	77.47	79.21
TraesCS6D01G008200.1	Wheat	cytosol	75.55	77.9
TraesCS6A01G005600.1	Wheat	cytosol	73.9	76.2
TraesCS6B01G011100.1	Wheat	cytosol	74.73	75.56
TraesCS1D01G359500.1	Wheat	cytosol	47.53	73.93
HORVU3Hr1G116770.1	Barley	cytosol	77.2	69.73
CDY18302	Canola	cytosol	34.89	61.65
CDY18304	Canola	cytosol	34.89	61.65
KRH53638	Soybean	mitochondrion	61.81	61.64
Solyc03g080180.2.1	Tomato	extracellular	60.44	61.62
KRH64288	Soybean	cytosol, nucleus	61.26	61.1
PGSC0003DMT400001512	Potato	cytosol	60.71	60.88
KRH53640	Soybean	cytosol	60.99	60.82
KRH53639	Soybean	cytosol	60.71	60.38
AT5G54160.1	Thale cress	cytosol	59.89	60.06
CDY43839	Canola	cytosol	59.07	59.07
CDY18306	Canola	cytosol	59.07	59.07
KRH64289	Soybean	cytosol	53.85	58.86
CDY43052	Canola	cytosol	58.79	58.79
Bra029041.1-P	Field mustard	cytosol	58.79	58.79
Bra003007.1-P	Field mustard	cytosol	58.52	58.52
CDY14328	Canola	cytosol	58.52	58.52
CDY14330	Canola	cytosol	56.87	57.18
Bra003009.1-P	Field mustard	cytosol	54.4	56.57
CDY55338	Canola	cytosol	45.6	56.08
Bra026320.1-P	Field mustard	cytosol	45.6	56.08
Bra019031.1-P	Field mustard	cytosol	56.32	55.86
CDY29856	Canola	cytosol	55.49	55.04
CDX92835	Canola	cytosol	55.49	55.04
CDY28789	Canola	cytosol	53.57	54.02
Bra022700.1-P	Field mustard	cytosol	53.57	54.02
CDY19037	Canola	cytosol	54.67	53.93
Zm00001d048087_P001	Maize	cytosol	52.75	52.6
CDY19039	Canola	cytosol	50.0	51.7
CDY41780	Canola	cytosol	35.16	50.0
KRH14071	Soybean	cytosol	27.75	49.03
Zm00001d051870_P001	Maize	cytosol	38.74	37.7
VIT_16s0098g00850.t01	Wine grape	cytosol	63.19	31.08

Protein Annotations

Gene3D:1.10.10.10	EntrezGene:100125646	MapMan:21.6.1.7	Gene3D:3.40.50.150	ProteinID:AAQ24340.1	ProteinID:AAQ24341.1
ProteinID:AQK50725.1	InterPro:De-COase2_CS	EMBL:EF586877	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0009058
GO:GO:0009699	GO:GO:0009809	GO:GO:0009987	GO:GO:0016740	GO:GO:0017096	GO:GO:0019748
GO:GO:0030187	GO:GO:0030744	GO:GO:0032259	GO:GO:0046983	GO:GO:0047763	GO:GO:0051555
InterPro:IPR016461	InterPro:IPR036388	InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100
PIRSF:PIRSF005739	ScanProsite:PS00879	PFscan:PS51683	PANTHER:PTHR11746	PANTHER:PTHR11746:SF120	InterPro:Plant_MeTrfase_dimerisation
UniProt:Q6VWG3	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335	UniParc:UPI00001BD3FA	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d049541	EnsemblPlants:Zm00001d049541_P001	EnsemblPlants:Zm00001d049541_T001	SEG:seg	:

Description

brown midrib3Flavone 3'-O-methyltransferase 1

Coordinates

chr4:-:33817769..33820095

Molecular Weight (calculated)

39555.7 Da

IEP (calculated)

5.578

GRAVY (calculated)

0.013

Length

364 amino acids

Sequence
(BLAST)

001: MGSTAGDVAA VVDEEACMYA MQLASSSILP MTLKNAIELG LLEVLQKEAG GGKAALAPEE VVARMPAAPG DPAAAAAMVD RMLRLLASYD VVRCQMEDRD
101: GRYERRYSAA PVCKWLTPNE DGVSMAALAL MNQDKVLMES WYYLKDAVLD GGIPFNKAYG MTAFEYHGTD SRFNRVFNEG MKNHSVIITK KLLDFYTGFE
201: GVSTLVDVGG GVGATLHAIT SRHPHISGVN FDLPHVISEA PPFPGVRHVG GDMFASVPAG DAILMKWILH DWSDAHCATL LKNCYDALPE NGKVIVVECV
301: LPVNTEATPK AQGVFHVDMI MLAHNPGGKE RYEREFRELA KGAGFSGFKA TYIYANAWAI EFIK

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.