Factsheet for Solyc03g080180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 4
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g008430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54160.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001512	Potato	cytosol	95.52	93.94
KRH64288	Soybean	cytosol, nucleus	77.59	75.89
KRH53638	Soybean	mitochondrion	77.31	75.62
KRH53640	Soybean	cytosol	77.31	75.62
KRH53639	Soybean	cytosol	77.03	75.14
CDY18302	Canola	cytosol	42.58	73.79
CDY18304	Canola	cytosol	42.58	73.79
AT5G54160.1	Thale cress	cytosol	74.23	73.0
KRH64289	Soybean	cytosol	67.79	72.67
CDY43839	Canola	cytosol	73.11	71.7
Bra029041.1-P	Field mustard	cytosol	72.83	71.43
CDY43052	Canola	cytosol	72.83	71.43
CDY18306	Canola	cytosol	71.99	70.6
CDY14330	Canola	cytosol	71.43	70.44
Bra003007.1-P	Field mustard	cytosol	71.43	70.05
CDY14328	Canola	cytosol	71.43	70.05
Bra003009.1-P	Field mustard	cytosol	68.35	69.71
Bra019031.1-P	Field mustard	cytosol	70.03	68.12
CDX92835	Canola	cytosol	69.75	67.85
CDY29856	Canola	cytosol	69.47	67.57
Bra026320.1-P	Field mustard	cytosol	54.62	65.88
CDY55338	Canola	cytosol	54.62	65.88
CDY19037	Canola	cytosol	66.95	64.77
GSMUA_Achr3P27470_001	Banana	cytosol	64.71	63.81
GSMUA_Achr9P23460_001	Banana	cytosol	59.66	63.77
CDY19039	Canola	cytosol	62.75	63.64
TraesCS6D01G008200.1	Wheat	cytosol	62.75	63.46
TraesCS7A01G333900.1	Wheat	cytosol	63.59	63.06
TraesCS7D01G341500.1	Wheat	cytosol, golgi, unclear	63.59	63.06
HORVU7Hr1G082280.1	Barley	cytosol	63.03	62.5
TraesCS7B01G245500.1	Wheat	cytosol	63.03	62.5
TraesCS3B01G612000.1	Wheat	cytosol	62.18	62.36
TraesCS3D01G540200.1	Wheat	cytosol	62.18	62.36
TraesCS6A01G005600.1	Wheat	cytosol	61.62	62.32
TraesCS3A01G534900.1	Wheat	cytosol	61.9	62.08
TraesCS6B01G011100.1	Wheat	cytosol	61.9	61.39
GSMUA_Achr1P06370_001	Banana	cytosol	62.75	61.37
Bra022700.1-P	Field mustard	cytosol	61.9	61.22
CDY28789	Canola	cytosol	61.9	61.22
KRH14071	Soybean	cytosol	35.01	60.68
Zm00001d049541_P001	Maize	cytosol, extracellular, mitochondrion	61.62	60.44
EES14578	Sorghum	cytosol	60.5	59.67
Os08t0157500-01	Rice	cytosol, plasma membrane	61.06	59.24
GSMUA_AchrUn_...	Banana	cytosol	59.38	58.4
CDY41780	Canola	cytosol	41.74	58.2
Solyc06g060200.1.1	Tomato	cytosol	20.45	57.94
GSMUA_Achr9P23470_001	Banana	cytosol	53.78	57.48
TraesCS1D01G359500.1	Wheat	cytosol	37.53	57.27
TraesCS4A01G344100.1	Wheat	cytosol	37.53	57.27
GSMUA_AchrUn_...	Banana	cytosol	57.98	57.18
GSMUA_Achr2P04360_001	Banana	cytosol	57.14	56.2
GSMUA_Achr4P24480_001	Banana	cytosol	56.58	55.96
GSMUA_Achr2P04420_001	Banana	cytosol	56.58	55.65
GSMUA_Achr2P04390_001	Banana	cytosol	56.02	55.25
GSMUA_Achr2P04380_001	Banana	cytosol	56.3	55.22
HORVU3Hr1G116770.1	Barley	cytosol	62.18	55.09
TraesCS5D01G488900.1	Wheat	cytosol	54.06	54.67
GSMUA_Achr2P04860_001	Banana	cytosol	55.46	54.4
Solyc10g005060.2.1	Tomato	cytosol	55.46	54.4
GSMUA_Achr9P23490_001	Banana	cytosol	33.05	54.38
TraesCS2B01G066100.1	Wheat	cytosol	54.34	54.34
GSMUA_Achr2P04480_001	Banana	cytosol	34.73	54.15
GSMUA_Achr10P...	Banana	cytosol	54.9	54.14
TraesCS5D01G528600.1	Wheat	cytosol	54.62	54.02
TraesCSU01G152500.1	Wheat	cytosol	54.34	53.89
TraesCS2A01G051600.2	Wheat	cytosol	53.78	53.78
TraesCS7D01G538900.1	Wheat	endoplasmic reticulum, vacuole	52.94	53.69
TraesCS5D01G488800.2	Wheat	cytosol	54.34	53.59
TraesCS1A01G407500.1	Wheat	cytosol	48.18	53.58
HORVU1Hr1G003370.2	Barley	cytosol	52.94	53.39
TraesCSU01G024300.1	Wheat	cytosol	53.22	53.22
TraesCS7D01G539100.1	Wheat	cytosol	52.38	53.12
GSMUA_Achr2P04820_001	Banana	cytosol	48.74	53.05
HORVU1Hr1G011930.1	Barley	cytosol	52.1	52.84
HORVU1Hr1G089620.1	Barley	cytosol	55.46	52.8
TraesCS2B01G617300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	51.82	52.71
TraesCS2B01G065800.1	Wheat	cytosol	16.53	52.68
TraesCSU01G183500.1	Wheat	cytosol	16.53	52.68
HORVU4Hr1G001250.1	Barley	cytosol	52.66	52.51
TraesCS2D01G052200.1	Wheat	cytosol	51.54	51.98
GSMUA_Achr2P04410_001	Banana	cytosol	52.66	51.93
HORVU2Hr1G119660.1	Barley	cytosol	52.66	51.93
TraesCS5B01G036200.1	Wheat	vacuole	50.98	51.85
HORVU7Hr1G088940.1	Barley	cytosol	32.77	51.77
GSMUA_Achr2P04470_001	Banana	cytosol	52.38	51.66
TraesCS5B01G036100.1	Wheat	endoplasmic reticulum, vacuole	50.7	51.57
GSMUA_AchrUn_...	Banana	cytosol	52.1	51.52
TraesCS2D01G568300.1	Wheat	cytosol	50.7	51.27
TraesCSU01G013300.1	Wheat	cytosol	51.26	51.26
GSMUA_AchrUn_...	Banana	cytosol, vacuole	51.82	51.25
GSMUA_Achr9P28010_001	Banana	cytosol, plasma membrane, vacuole	50.98	50.98
TraesCSU01G001300.1	Wheat	cytosol	15.97	50.89
GSMUA_Achr2P04370_001	Banana	cytosol	51.54	50.83
GSMUA_Achr2P04840_001	Banana	cytosol	42.02	49.67
Solyc06g083450.2.1	Tomato	cytosol	31.93	49.57
GSMUA_AchrUn_...	Banana	cytosol	38.38	49.46
GSMUA_AchrUn_...	Banana	cytosol	41.74	49.34
HORVU3Hr1G049400.1	Barley	cytosol	22.13	49.07
HORVU7Hr1G119480.2	Barley	cytosol	48.46	48.46
GSMUA_Achr9P18820_001	Banana	mitochondrion	46.78	47.85
Solyc06g060220.1.1	Tomato	cytosol	15.13	46.15
Solyc06g007960.2.1	Tomato	cytosol	45.94	45.43
Os04t0104900-01	Rice	cytosol	44.82	45.2
Os04t0176200-00	Rice	cytosol	29.41	44.68
GSMUA_Achr2P04400_001	Banana	cytosol, golgi, mitochondrion	52.38	44.52
Zm00001d048087_P001	Maize	cytosol	45.1	44.11
Os12t0240900-01	Rice	cytosol	45.94	43.73
OQU93005	Sorghum	cytosol	44.26	43.41
Os04t0175600-01	Rice	plasma membrane	45.38	42.86
OQU79974	Sorghum	cytosol	43.42	42.01
TraesCS3B01G448600.1	Wheat	cytosol	43.14	41.62
Os04t0175900-01	Rice	cytosol, plasma membrane	42.86	41.24
EES13432	Sorghum	cytosol, plastid, vacuole	42.02	40.11
KXG24559	Sorghum	cytosol	42.02	39.79
KXG24554	Sorghum	cytosol	41.74	39.63
Os12t0202700-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	24.37	39.37
HORVU1Hr1G089700.1	Barley	cytosol, vacuole	40.34	39.34
TraesCS1B01G040400.1	Wheat	cytosol	25.77	38.98
TraesCS1D01G033700.1	Wheat	cytosol	39.5	38.42
VIT_16s0098g00850.t01	Wine grape	cytosol	78.99	38.11
TraesCS1B01G041100.1	Wheat	cytosol	38.38	37.33
TraesCS1A01G032000.1	Wheat	cytosol	38.1	37.06
Solyc10g085830.1.1	Tomato	plastid	35.29	34.9
Os12t0199500-00	Rice	cytosol	19.33	33.01
Solyc01g111900.2.1	Tomato	cytosol	32.49	32.49
Solyc12g009110.1.1	Tomato	cytosol	31.37	30.35

Protein Annotations

Gene3D:1.10.10.10	MapMan:21.6.1.7	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008171	GO:GO:0008757
GO:GO:0009058	GO:GO:0009506	GO:GO:0009809	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0019438	GO:GO:0019748	GO:GO:0030744	GO:GO:0030755	GO:GO:0032259	GO:GO:0033799
GO:GO:0046983	GO:GO:0047763	GO:GO:0051555	InterPro:IPR016461	InterPro:IPR036388	UniProt:K4BHZ4
InterPro:O-MeTrfase_COMT	InterPro:O_MeTrfase_2	PFAM:PF00891	PFAM:PF08100	PIRSF:PIRSF005739	PFscan:PS51683
PANTHER:PTHR11746	PANTHER:PTHR11746:SF114	InterPro:Plant_MeTrfase_dimerisation	InterPro:SAM-dependent_MTases	SUPFAM:SSF46785	SUPFAM:SSF53335
EnsemblPlantsGene:Solyc03g080180.2	EnsemblPlants:Solyc03g080180.2.1	UniParc:UPI0002768367	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	:

Description

No Description!

Coordinates

chr3:+:52066920..52070809

Molecular Weight (calculated)

38955.2 Da

IEP (calculated)

5.834

GRAVY (calculated)

0.020

Length

357 amino acids

Sequence
(BLAST)

001: MGSTSLTQTE DEAFLFAMQL ASASVLPMVL KSAVELELLE LMAKAGPGAS ISPAELASQL PCKNPDAPVM LDRMLRLLAA YSVLNCTLRT LPDGRVERLY
101: SLAPVCKFLT KNADGVSVAP LLLMNQDKVL MQSWYHLKDA VLDGGIPFNK AYGMTAFEYH GTDPRFNKVF NRGMSDHTTL SIKKILEDYK GFEGLNSIVD
201: VGGGTGATVS MIVSKYPSIK GINFDLPHVI EDAPAYPGVE HIGGDMFVSV PKADAIFMKW ICHDWSDEHC LKFLKNCYEA VPANGKVIIA ECLLPEVPDT
301: SSSTKNTVHV DVIMLAHNPG GKERTEKEFE ALAKGAGFNG FTKASCAYNT WIMEFTK

Best Arabidopsis Sequence Match ( AT5G54160.1 )
(BLAST)

001: MGSTAETQLT PVQVTDDEAA LFAMQLASAS VLPMALKSAL ELDLLEIMAK NGSPMSPTEI ASKLPTKNPE APVMLDRILR LLTSYSVLTC SNRKLSGDGV
101: ERIYGLGPVC KYLTKNEDGV SIAALCLMNQ DKVLMESWYH LKDAILDGGI PFNKAYGMSA FEYHGTDPRF NKVFNNGMSN HSTITMKKIL ETYKGFEGLT
201: SLVDVGGGIG ATLKMIVSKY PNLKGINFDL PHVIEDAPSH PGIEHVGGDM FVSVPKGDAI FMKWICHDWS DEHCVKFLKN CYESLPEDGK VILAECILPE
301: TPDSSLSTKQ VVHVDCIMLA HNPGGKERTE KEFEALAKAS GFKGIKVVCD AFGVNLIELL KKL

Arabidopsis Description

OMT1Flavone 3'-O-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.