Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G54160.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT5G54160.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT5G54160.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G001300.1 | Wheat | cytosol | 33.64 | 96.43 |
| TraesCS4A01G344100.1 | Wheat | cytosol | 70.09 | 96.15 |
| TraesCSU01G152500.1 | Wheat | cytosol | 98.13 | 87.5 |
| TraesCS5D01G528600.1 | Wheat | cytosol | 94.08 | 83.66 |
| TraesCS2A01G051600.2 | Wheat | cytosol | 68.22 | 61.34 |
| TraesCS3A01G534900.1 | Wheat | cytosol | 65.73 | 59.27 |
| TraesCS6A01G005600.1 | Wheat | cytosol | 65.11 | 59.21 |
| TraesCS7A01G333900.1 | Wheat | cytosol | 66.36 | 59.17 |
| HORVU1Hr1G089620.1 | Barley | cytosol | 64.17 | 54.93 |
| CDY18302 | Canola | cytosol | 33.96 | 52.91 |
| CDY18304 | Canola | cytosol | 33.96 | 52.91 |
| KRH64289 | Soybean | cytosol | 52.65 | 50.75 |
| KRH64288 | Soybean | cytosol, nucleus | 55.45 | 48.77 |
| KRH53638 | Soybean | mitochondrion | 55.45 | 48.77 |
| KRH53640 | Soybean | cytosol | 55.14 | 48.49 |
| AT5G54160.1 | Thale cress | cytosol | 54.83 | 48.48 |
| Solyc03g080180.2.1 | Tomato | extracellular | 53.58 | 48.18 |
| Bra003007.1-P | Field mustard | cytosol | 54.52 | 48.08 |
| CDY18306 | Canola | cytosol | 54.52 | 48.08 |
| CDY14328 | Canola | cytosol | 54.52 | 48.08 |
| PGSC0003DMT400001512 | Potato | cytosol | 54.21 | 47.93 |
| KRH53639 | Soybean | cytosol | 54.52 | 47.81 |
| CDY43052 | Canola | cytosol | 53.89 | 47.53 |
| Bra029041.1-P | Field mustard | cytosol | 53.89 | 47.53 |
| CDY43839 | Canola | cytosol | 53.58 | 47.25 |
| KRH14071 | Soybean | cytosol | 30.22 | 47.09 |
| Bra003009.1-P | Field mustard | cytosol | 50.78 | 46.57 |
| CDY14330 | Canola | cytosol | 52.34 | 46.41 |
| Bra019031.1-P | Field mustard | cytosol | 51.4 | 44.96 |
| CDY29856 | Canola | cytosol | 51.09 | 44.69 |
| CDY19037 | Canola | cytosol | 51.09 | 44.44 |
| CDY55338 | Canola | cytosol | 40.81 | 44.26 |
| Bra026320.1-P | Field mustard | cytosol | 40.81 | 44.26 |
| CDX92835 | Canola | cytosol | 50.47 | 44.14 |
| CDY28789 | Canola | cytosol | 48.91 | 43.49 |
| Bra022700.1-P | Field mustard | cytosol | 48.91 | 43.49 |
| CDY19039 | Canola | cytosol | 46.42 | 42.33 |
| CDY41780 | Canola | cytosol | 32.4 | 40.62 |
| TraesCS1A01G032000.1 | Wheat | cytosol | 40.81 | 35.69 |
| TraesCS6A01G405200.1 | Wheat | cytosol | 35.2 | 31.13 |
| VIT_16s0098g00850.t01 | Wine grape | cytosol | 56.39 | 24.46 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:3.40.50.150 | MapMan:50.2.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008171 | GO:GO:0016740 |
| GO:GO:0046983 | InterPro:IPR016461 | InterPro:IPR036388 | InterPro:O-MeTrfase_COMT | InterPro:O_MeTrfase_2 | PFAM:PF00891 |
| PFAM:PF08100 | PIRSF:PIRSF005739 | PFscan:PS51683 | PANTHER:PTHR11746 | PANTHER:PTHR11746:SF114 | InterPro:Plant_MeTrfase_dimerisation |
| InterPro:SAM-dependent_MTases | SUPFAM:SSF46785 | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS1A01G407500 | EnsemblPlants:TraesCS1A01G407500.1 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:570046753..570051185
Molecular Weight (calculated)
35417.1 Da
IEP (calculated)
6.078
GRAVY (calculated)
0.018
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEVLVSAGG EMLSPSEVIA RLPSKAANPD APAMVDRILR LLASYNVVLC EVDEGEDGLF ARRYGSAPVC KWLTPNEDGV SIAALVLMIQ DKVNMEGWYH
101: LKDAILDGGL PFQRAYGMTL FVYNSTNMHV NSMFNEAMKN HSTIITKKLL EFYMGFDSVG TLVDVAGGVG ATIHTITSKY PHIKGVNFDL PHAISDAPSF
201: PGVEHVGGDM FEKMPSGDTI LLKWILHDWT DKHCTNLLRN CFDALPAHGK VIVMEGILPL KPDSTSRGQL MFLGDMIMLM HTPGGKERQQ REFEELARGA
301: GFTSVKTTHI YGNAWVIEFI K
101: LKDAILDGGL PFQRAYGMTL FVYNSTNMHV NSMFNEAMKN HSTIITKKLL EFYMGFDSVG TLVDVAGGVG ATIHTITSKY PHIKGVNFDL PHAISDAPSF
201: PGVEHVGGDM FEKMPSGDTI LLKWILHDWT DKHCTNLLRN CFDALPAHGK VIVMEGILPL KPDSTSRGQL MFLGDMIMLM HTPGGKERQQ REFEELARGA
301: GFTSVKTTHI YGNAWVIEFI K
001: MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
101: RAYGLGKVGK KLIKDEDGFS IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN HTSIVMKKIL ENYIGFEGVS
201: DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR
301: EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL YPN
Arabidopsis Description
F5F19.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9ZU24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.